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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170187227
CEPA01136810
513936
Cyanobacteriota
>WENV170185993
CEPA01010707
513841
Cyanobacteriota
>WENV170186069
CEPA01015742
128268
Cyanobacteriota
CAG
Leu
>WENV170185924
CEPA01003218
311034
Cyanobacteriota
CAT
Met
>WENV170186484
CEPA01053466
311034
Cyanobacteriota
CAT
Met
>WENV170186463
CEPA01051683
311068
Cyanobacteriota
CCT
Arg
>WENV170186236
CEPA01027083
311070
Cyanobacteriota
CCT
Arg
>WENV170186232
CEPA01026647
518132
Cyanobacteriota
CGC
Ala
>WENV170186458
CEPA01051199
510628
Cyanobacteriota
CGT
Thr
>WENV170187331
CEPA01149086
510628
Cyanobacteriota
CGT
Thr
>WENV170187182
CEPA01130729
310467
Cyanobacteriota
GAT
Ile
>WENV170186225
CEPA01026406
513776
Cyanobacteriota
GGC
Ala
>WENV170186501
CEPA01054343
513776
Cyanobacteriota
GGC
Ala
>WENV170186611
CEPA01064518
513776
Cyanobacteriota
GGC
Ala
>WENV170186798
CEPA01086084
513776
Cyanobacteriota
GGC
Ala
>WENV170186909
CEPA01096925
513776
Cyanobacteriota
GGC
Ala
>WENV170187180
CEPA01130676
513776
Cyanobacteriota
GGC
Ala
>WENV170187402
CEPA01157280
513776
Cyanobacteriota
GGC
Ala
>WENV170187415
CEPA01158898
513776
Cyanobacteriota
GGC
Ala
>WENV170187510
CEPA01165990
513776
Cyanobacteriota
GGC
Ala
>WENV170186103
CEPA01018313
310954
Cyanobacteriota
GTC
Asp
>WENV170186306
CEPA01033839
310954
Cyanobacteriota
GTC
Asp
>WENV170187019
CEPA01109521
310954
Cyanobacteriota
GTC
Asp
>WENV170187064
CEPA01115912
310954
Cyanobacteriota
GTC
Asp
>WENV170187256
CEPA01141376
310954
Cyanobacteriota
GTC
Asp
>WENV170185945
CEPA01005679
510626
Cyanobacteriota
GTG
His
>WENV170187555
CEPA01169531
510626
Cyanobacteriota
GTG
His
>WENV170186885
CEPA01094573
205244
Cyanobacteriota
TAG
Leu
>WENV170187154
CEPA01127428
310969
Cyanobacteriota
TCT
Arg
>WENV170186574
CEPA01061766
53582
Cyanobacteriota
TGA
Ser
>WENV170187197
CEPA01133085
53582
Cyanobacteriota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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