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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170209326
CEPV01049297
656944
Gammaproteobacteria
CCT
Arg
>WENV170208506
CEPV01001608
270982
Gammaproteobacteria
GAT
Ile
>WENV170208606
CEPV01006219
270982
Gammaproteobacteria
GAT
Ile
>WENV170209148
CEPV01036472
270982
Gammaproteobacteria
GAT
Ile
>WENV170208713
CEPV01011584
272023
Gammaproteobacteria
GAT
Ile
>WENV170208698
CEPV01010584
30353
Gammaproteobacteria
GGA
Ser
>WENV170208524
CEPV01002431
281115
Gammaproteobacteria
GAT
Ile
>WENV170209679
CEPV01079532
297860
Gammaproteobacteria
GAC
Val
>WENV170208618
CEPV01006961
276971
Gammaproteobacteria
ACG
Arg
>WENV170210039
CEPV01103280
282333
Gammaproteobacteria
GAC
Val
>WENV170210291
CEPV01182083
218566
Gammaproteobacteria
GTA
Tyr
>WENV170209625
CEPV01075791
278982
Gammaproteobacteria
CCG
Arg
>WENV170208566
CEPV01004514
275934
Gammaproteobacteria
GGG
Pro
>WENV170208504
CEPV01001539
780765
Gammaproteobacteria
CCC
Gly
>WENV170208870
CEPV01018862
780765
Gammaproteobacteria
CCC
Gly
>WENV170209292
CEPV01047282
451732
Gammaproteobacteria
GCC
Gly
>WENV170209860
CEPV01090127
276972
Gammaproteobacteria
CCA
Trp
>WENV170208728
CEPV01012309
456234
Gammaproteobacteria
GAA
Phe
>WENV170208798
CEPV01015838
454091
Gammaproteobacteria
GGC
Ala
>WENV170208617
CEPV01006961
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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