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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170226611
CEQF01000129
655365
Alphaproteobacteria
TTC
Glu
>WENV170226612
CEQF01000129
655365
Alphaproteobacteria
TTC
Glu
>WENV170226833
CEQF01019639
455289
Alphaproteobacteria
TTT
Lys
>WENV170228158
CEQF01225515
452565
Alphaproteobacteria
GAA
Phe
>WENV170227465
CEQF01089951
780331
Alphaproteobacteria
TCC
Gly
>WENV170227699
CEQF01122482
273155
Alphaproteobacteria
GTG
His
>WENV170227662
CEQF01117258
454180
Alphaproteobacteria
CGT
Thr
>WENV170226921
CEQF01027602
274224
Alphaproteobacteria
CAT
Met
>WENV170227586
CEQF01107373
451742
Alphaproteobacteria
GGC
Ala
>WENV170227397
CEQF01080095
19999
Alphaproteobacteria
GCT
Ser
>WENV170228312
CEQF01264130
655363
Alphaproteobacteria
GGT
Thr
>WENV170226658
CEQF01004344
274144
Alphaproteobacteria
GTG
His
>WENV170227646
CEQF01115301
180320
Alphaproteobacteria
TAG
Leu
>WENV170226908
CEQF01026620
455172
Alphaproteobacteria
GGC
Ala
>WENV170227710
CEQF01123307
273450
Alphaproteobacteria
TCT
Arg
>WENV170226906
CEQF01026445
47329
Alphaproteobacteria
TGA
Ser
>WENV170226662
CEQF01004477
274138
Alphaproteobacteria
CAT
Met
>WENV170227014
CEQF01037151
454512
Alphaproteobacteria
CCA
Trp
>WENV170226799
CEQF01016354
455360
Alphaproteobacteria
CGC
Ala
>WENV170227488
CEQF01093076
780346
Alphaproteobacteria
CTG
Gln
>WENV170227852
CEQF01144096
452755
Alphaproteobacteria
TAC
Val
>WENV170227444
CEQF01087312
112839
Alphaproteobacteria
CAG
Leu
>WENV170227661
CEQF01117258
780039
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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