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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170228190
CEQF01236215
779495
Gammaproteobacteria
CCC
Gly
>WENV170226774
CEQF01014234
454866
Gammaproteobacteria
TAC
Val
>WENV170227170
CEQF01052247
454866
Gammaproteobacteria
TAC
Val
>WENV170227909
CEQF01150724
457453
Gammaproteobacteria
TTT
Lys
>WENV170227856
CEQF01145171
46027
Gammaproteobacteria
GGA
Ser
>WENV170228017
CEQF01173518
653594
Gammaproteobacteria
CCT
Arg
>WENV170227359
CEQF01074773
273752
Gammaproteobacteria
CAT
Met
>WENV170227954
CEQF01155149
273752
Gammaproteobacteria
CAT
Met
>WENV170227827
CEQF01141304
454857
Gammaproteobacteria
GTG
His
>WENV170226938
CEQF01029924
273755
Gammaproteobacteria
CAT
Met
>WENV170227208
CEQF01056335
451982
Gammaproteobacteria
GGC
Ala
>WENV170227507
CEQF01096659
273857
Gammaproteobacteria
TGG
Pro
>WENV170227374
CEQF01076450
273749
Gammaproteobacteria
CCA
Trp
>WENV170227967
CEQF01155724
276185
Gammaproteobacteria
TGG
Pro
>WENV170226723
CEQF01010367
31212
Gammaproteobacteria
TGA
Ser
>WENV170226724
CEQF01010367
31212
Gammaproteobacteria
TGA
Ser
>WENV170227601
CEQF01109074
276973
Gammaproteobacteria
GAC
Val
>WENV170227199
CEQF01055533
179997
Gammaproteobacteria
GTA
Tyr
>WENV170228069
CEQF01191973
114536
Gammaproteobacteria
CAA
Leu
>WENV170227138
CEQF01049210
30385
Gammaproteobacteria
GCT
Ser
>WENV170226812
CEQF01017514
452412
Gammaproteobacteria
GCC
Gly
>WENV170226788
CEQF01015231
30516
Gammaproteobacteria
TGA
Ser
>WENV170227683
CEQF01119831
451876
Gammaproteobacteria
GTG
His
>WENV170227508
CEQF01096659
273858
Gammaproteobacteria
TCT
Arg
>WENV170227528
CEQF01099807
180482
Gammaproteobacteria
GAG
Leu
>WENV170226720
CEQF01009976
47153
Gammaproteobacteria
GGA
Ser
>WENV170227169
CEQF01052247
454864
Gammaproteobacteria
TAC
Val
>WENV170228258
CEQF01257758
113485
Gammaproteobacteria
CAA
Leu
>WENV170227127
CEQF01048253
45712
Gammaproteobacteria
GGA
Ser
>WENV170227125
CEQF01048229
780764
Gammaproteobacteria
TCC
Gly
>WENV170226760
CEQF01013355
453897
Gammaproteobacteria
TAC
Val
>WENV170226699
CEQF01008030
270907
Gammaproteobacteria
TGG
Pro
>WENV170226641
CEQF01002419
466510
Gammaproteobacteria
GCC
Gly
>WENV170227905
CEQF01150102
779494
Gammaproteobacteria
GCA
Cys
>WENV170227731
CEQF01127314
276372
Gammaproteobacteria
ACG
Arg
>WENV170228210
CEQF01241736
271316
Gammaproteobacteria
CAT
Met
>WENV170227136
CEQF01049151
271253
Gammaproteobacteria
CAT
Met
>WENV170227534
CEQF01100693
270904
Gammaproteobacteria
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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