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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170237787
CEQM01083165
456728
Bacteroidota
CAT
Met
>WENV170237558
CEQM01063238
271717
Bacteroidota
GTC
Asp
>WENV170237955
CEQM01101383
271717
Bacteroidota
GTC
Asp
>WENV170238246
CEQM01126151
271717
Bacteroidota
GTC
Asp
>WENV170238443
CEQM01135439
271717
Bacteroidota
GTC
Asp
>WENV170238000
CEQM01107171
456729
Bacteroidota
GAA
Phe
>WENV170237257
CEQM01041775
452741
Bacteroidota
TCC
Gly
>WENV170237973
CEQM01103418
452487
Bacteroidota
CCA
Trp
>WENV170238110
CEQM01116742
452487
Bacteroidota
CCA
Trp
>WENV170238025
CEQM01109045
655825
Bacteroidota
TTC
Glu
>WENV170237342
CEQM01047782
241634
Bacteroidota
TGG
Pro
>WENV170236672
CEQM01003543
277953
Bacteroidota
GTC
Asp
>WENV170236644
CEQM01002129
240683
Bacteroidota
TGG
Pro
>WENV170236936
CEQM01021149
275165
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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