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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170244690
CEQP01039222
270982
Gammaproteobacteria
GAT
Ile
>WENV170244236
CEQP01009708
30865
Gammaproteobacteria
GCT
Ser
>WENV170244237
CEQP01009708
276971
Gammaproteobacteria
ACG
Arg
>WENV170246127
CEQP01151845
457171
Gammaproteobacteria
GTT
Asn
>WENV170245475
CEQP01098037
780642
Gammaproteobacteria
GCA
Cys
>WENV170245571
CEQP01106835
271287
Gammaproteobacteria
CAT
Met
>WENV170246427
CEQP01176317
452404
Gammaproteobacteria
TGT
Thr
>WENV170246619
CEQP01270963
179960
Gammaproteobacteria
TAG
Leu
>WENV170245818
CEQP01128877
781121
Gammaproteobacteria
GCA
Cys
>WENV170246620
CEQP01270963
779459
Gammaproteobacteria
CCA
Trp
>WENV170245705
CEQP01117629
276972
Gammaproteobacteria
CCA
Trp
>WENV170246747
CEQP01309797
276970
Gammaproteobacteria
CCG
Arg
>WENV170246510
CEQP01226237
655194
Gammaproteobacteria
GGT
Thr
>WENV170246485
CEQP01212543
30792
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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