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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170268889
CERH01000715
655365
Alphaproteobacteria
TTC
Glu
>WENV170269069
CERH01034935
180489
Alphaproteobacteria
TAG
Leu
>WENV170269061
CERH01032633
655167
Alphaproteobacteria
TTC
Glu
>WENV170269037
CERH01028490
273805
Alphaproteobacteria
ACG
Arg
>WENV170269259
CERH01080528
455289
Alphaproteobacteria
TTT
Lys
>WENV170269284
CERH01084774
46070
Alphaproteobacteria
CGA
Ser
>WENV170269148
CERH01057786
653534
Alphaproteobacteria
GCC
Gly
>WENV170269031
CERH01027275
46190
Alphaproteobacteria
GGA
Ser
>WENV170269007
CERH01022368
30553
Alphaproteobacteria
GGA
Ser
>WENV170269356
CERH01119777
780331
Alphaproteobacteria
TCC
Gly
>WENV170268988
CERH01018936
273799
Alphaproteobacteria
CCG
Arg
>WENV170269033
CERH01028023
218119
Alphaproteobacteria
>WENV170269184
CERH01066611
218119
Alphaproteobacteria
>WENV170268972
CERH01015904
456891
Alphaproteobacteria
CGT
Thr
>WENV170269312
CERH01091038
452894
Alphaproteobacteria
CCA
Trp
>WENV170268928
CERH01009828
653532
Alphaproteobacteria
GTT
Asn
>WENV170268892
CERH01001377
19999
Alphaproteobacteria
GCT
Ser
>WENV170268886
CERH01000259
655363
Alphaproteobacteria
GGT
Thr
>WENV170269030
CERH01026929
274144
Alphaproteobacteria
GTG
His
>WENV170268992
CERH01020014
455172
Alphaproteobacteria
GGC
Ala
>WENV170269210
CERH01072849
655566
Alphaproteobacteria
GAC
Val
>WENV170269081
CERH01038373
273801
Alphaproteobacteria
GTG
His
>WENV170269126
CERH01052191
779636
Alphaproteobacteria
CTG
Gln
>WENV170269276
CERH01083243
779636
Alphaproteobacteria
CTG
Gln
>WENV170268942
CERH01011659
274138
Alphaproteobacteria
CAT
Met
>WENV170269232
CERH01076491
653533
Alphaproteobacteria
CAC
Val
>WENV170269138
CERH01054786
454512
Alphaproteobacteria
CCA
Trp
>WENV170268893
CERH01001399
270796
Alphaproteobacteria
GTC
Asp
>WENV170269079
CERH01037158
270796
Alphaproteobacteria
GTC
Asp
>WENV170269034
CERH01028023
782365
Alphaproteobacteria
TCC
Gly
>WENV170268980
CERH01017376
274141
Alphaproteobacteria
CCT
Arg
>WENV170269114
CERH01049519
655822
Alphaproteobacteria
GAC
Val
>WENV170269009
CERH01022441
671670
Alphaproteobacteria
CAC
Val
>WENV170269110
CERH01047052
454914
Alphaproteobacteria
TTT
Lys
>WENV170269294
CERH01087844
654103
Alphaproteobacteria
GAA
Phe
>WENV170269167
CERH01061753
454913
Alphaproteobacteria
CGT
Thr
>WENV170269368
CERH01129550
274130
Alphaproteobacteria
CGG
Pro
>WENV170269253
CERH01079368
779596
Alphaproteobacteria
TCC
Gly
>WENV170269075
CERH01036488
301299
Alphaproteobacteria
CCG
Arg
>WENV170269306
CERH01090260
784639
Alphaproteobacteria
TCC
Gly
>WENV170268965
CERH01014754
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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