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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170307013
CESJ01105601
657483
Bacteroidota
TTG
Gln
>WENV170306364
CESJ01025783
456730
Bacteroidota
TTT
Lys
>WENV170306793
CESJ01073288
271717
Bacteroidota
GTC
Asp
>WENV170306926
CESJ01090169
456729
Bacteroidota
GAA
Phe
>WENV170306801
CESJ01074379
241614
Bacteroidota
GAC
Val
>WENV170307060
CESJ01114256
241614
Bacteroidota
GAC
Val
>WENV170306434
CESJ01032111
452741
Bacteroidota
TCC
Gly
>WENV170306449
CESJ01033754
452741
Bacteroidota
TCC
Gly
>WENV170306390
CESJ01028978
452487
Bacteroidota
CCA
Trp
>WENV170306550
CESJ01043320
452487
Bacteroidota
CCA
Trp
>WENV170306930
CESJ01090550
452487
Bacteroidota
CCA
Trp
>WENV170307233
CESJ01133865
452487
Bacteroidota
CCA
Trp
>WENV170306099
CESJ01003718
285374
Bacteroidota
GTC
Asp
>WENV170306674
CESJ01056084
285374
Bacteroidota
GTC
Asp
>WENV170306490
CESJ01037295
655825
Bacteroidota
TTC
Glu
>WENV170306422
CESJ01031253
459901
Bacteroidota
CCA
Trp
>WENV170306417
CESJ01030422
781319
Bacteroidota
GCA
Cys
>WENV170307087
CESJ01118573
185907
Bacteroidota
CAA
Leu
>WENV170306951
CESJ01094013
275494
Bacteroidota
CAT
Met
>WENV170306258
CESJ01017108
241654
Bacteroidota
TAC
Val
>WENV170306391
CESJ01029038
241654
Bacteroidota
TAC
Val
>WENV170306394
CESJ01029337
241407
Bacteroidota
TGG
Pro
>WENV170306456
CESJ01034334
241407
Bacteroidota
TGG
Pro
>WENV170307034
CESJ01109776
241407
Bacteroidota
TGG
Pro
>WENV170306200
CESJ01013182
657921
Bacteroidota
TTC
Glu
>WENV170307135
CESJ01123214
657921
Bacteroidota
TTC
Glu
>WENV170306949
CESJ01093746
276305
Bacteroidota
CAT
Met
>WENV170307046
CESJ01112043
241634
Bacteroidota
TGG
Pro
>WENV170307047
CESJ01112048
241634
Bacteroidota
TGG
Pro
>WENV170306110
CESJ01004764
296838
Bacteroidota
GAT
Ile
>WENV170306716
CESJ01062074
278725
Bacteroidota
GTT
Asn
>WENV170307133
CESJ01123087
278725
Bacteroidota
GTT
Asn
>WENV170306609
CESJ01050445
180640
Bacteroidota
GTA
Tyr
>WENV170306742
CESJ01064997
240683
Bacteroidota
TGG
Pro
>WENV170306714
CESJ01061730
242570
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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