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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170307056
CESJ01112722
275457
Gammaproteobacteria
ACG
Arg
>WENV170306779
CESJ01070503
455942
Gammaproteobacteria
GCC
Gly
>WENV170307410
CESJ01142925
276974
Gammaproteobacteria
GGG
Pro
>WENV170306565
CESJ01045775
30865
Gammaproteobacteria
GCT
Ser
>WENV170307288
CESJ01137980
276973
Gammaproteobacteria
GAC
Val
>WENV170307311
CESJ01139078
278982
Gammaproteobacteria
CCG
Arg
>WENV170306955
CESJ01094469
452412
Gammaproteobacteria
GCC
Gly
>WENV170307371
CESJ01141710
452412
Gammaproteobacteria
GCC
Gly
>WENV170307129
CESJ01122756
274092
Gammaproteobacteria
GTC
Asp
>WENV170307348
CESJ01140529
276972
Gammaproteobacteria
CCA
Trp
>WENV170307411
CESJ01142950
276972
Gammaproteobacteria
CCA
Trp
>WENV170307728
CESJ01286251
271286
Gammaproteobacteria
CAT
Met
>WENV170307191
CESJ01129162
291687
Gammaproteobacteria
TCT
Arg
>WENV170306339
CESJ01023673
454397
Gammaproteobacteria
TGT
Thr
>WENV170306622
CESJ01051608
454397
Gammaproteobacteria
TGT
Thr
>WENV170307190
CESJ01129162
276975
Gammaproteobacteria
TGG
Pro
>WENV170306088
CESJ01002491
30792
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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