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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170324734
CESS01102702
30610
Gammaproteobacteria
TGA
Ser
>WENV170324198
CESS01060227
274150
Gammaproteobacteria
CAT
Met
>WENV170325075
CESS01193819
656944
Gammaproteobacteria
CCT
Arg
>WENV170323595
CESS01010711
272023
Gammaproteobacteria
GAT
Ile
>WENV170324469
CESS01085408
273752
Gammaproteobacteria
CAT
Met
>WENV170324513
CESS01089151
276974
Gammaproteobacteria
GGG
Pro
>WENV170324485
CESS01086659
458351
Gammaproteobacteria
TTG
Gln
>WENV170323500
CESS01004115
276971
Gammaproteobacteria
ACG
Arg
>WENV170324670
CESS01096531
454857
Gammaproteobacteria
GTG
His
>WENV170324283
CESS01068764
273749
Gammaproteobacteria
CCA
Trp
>WENV170324136
CESS01053410
276973
Gammaproteobacteria
GAC
Val
>WENV170325068
CESS01193254
460378
Gammaproteobacteria
TAC
Val
>WENV170324023
CESS01044567
30516
Gammaproteobacteria
TGA
Ser
>WENV170323526
CESS01005784
780765
Gammaproteobacteria
CCC
Gly
>WENV170323738
CESS01020956
781121
Gammaproteobacteria
GCA
Cys
>WENV170324008
CESS01043412
459731
Gammaproteobacteria
GGT
Thr
>WENV170324574
CESS01093227
113485
Gammaproteobacteria
CAA
Leu
>WENV170324024
CESS01044567
12740
Gammaproteobacteria
GCT
Ser
>WENV170324328
CESS01072483
452908
Gammaproteobacteria
TTT
Lys
>WENV170323699
CESS01017530
271286
Gammaproteobacteria
CAT
Met
>WENV170324744
CESS01107646
454397
Gammaproteobacteria
TGT
Thr
>WENV170323447
CESS01000166
455237
Gammaproteobacteria
TGT
Thr
>WENV170325084
CESS01195859
182178
Gammaproteobacteria
CAA
Leu
>WENV170324429
CESS01082582
30792
Gammaproteobacteria
GGA
Ser
>WENV170324671
CESS01096555
655145
Gammaproteobacteria
CCT
Arg
>WENV170323716
CESS01019332
454091
Gammaproteobacteria
GGC
Ala
>WENV170323499
CESS01004115
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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