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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170329001
CESV01066463
275828
Alphaproteobacteria
GTC
Asp
>WENV170328997
CESV01065788
180489
Alphaproteobacteria
TAG
Leu
>WENV170329897
CESV01172843
180489
Alphaproteobacteria
TAG
Leu
>WENV170328457
CESV01016109
273805
Alphaproteobacteria
ACG
Arg
>WENV170329381
CESV01108872
273805
Alphaproteobacteria
ACG
Arg
>WENV170329277
CESV01095465
452884
Alphaproteobacteria
CCA
Trp
>WENV170329514
CESV01127198
218119
Alphaproteobacteria
>WENV170328768
CESV01045000
277700
Alphaproteobacteria
GTG
His
>WENV170328448
CESV01015392
274224
Alphaproteobacteria
CAT
Met
>WENV170330133
CESV01188230
653532
Alphaproteobacteria
GTT
Asn
>WENV170329750
CESV01157808
655358
Alphaproteobacteria
TTG
Gln
>WENV170329636
CESV01143387
270796
Alphaproteobacteria
GTC
Asp
>WENV170328676
CESV01035145
474526
Alphaproteobacteria
TAC
Val
>WENV170329085
CESV01075145
474526
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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