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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170328543
CESV01023360
273835
Bacteroidota
GTT
Asn
>WENV170330040
CESV01183261
273835
Bacteroidota
GTT
Asn
>WENV170329125
CESV01080001
32554
Bacteroidota
GGA
Ser
>WENV170330108
CESV01187488
271717
Bacteroidota
GTC
Asp
>WENV170328534
CESV01022703
456729
Bacteroidota
GAA
Phe
>WENV170330239
CESV01191631
456729
Bacteroidota
GAA
Phe
>WENV170329258
CESV01092869
456414
Bacteroidota
GAA
Phe
>WENV170330328
CESV01193609
456414
Bacteroidota
GAA
Phe
>WENV170329114
CESV01078989
241614
Bacteroidota
GAC
Val
>WENV170329651
CESV01145147
241614
Bacteroidota
GAC
Val
>WENV170329041
CESV01070329
452741
Bacteroidota
TCC
Gly
>WENV170328538
CESV01022873
452487
Bacteroidota
CCA
Trp
>WENV170328742
CESV01042733
452487
Bacteroidota
CCA
Trp
>WENV170328846
CESV01052142
452487
Bacteroidota
CCA
Trp
>WENV170329280
CESV01095834
452487
Bacteroidota
CCA
Trp
>WENV170330203
CESV01191153
452487
Bacteroidota
CCA
Trp
>WENV170330308
CESV01193314
452487
Bacteroidota
CCA
Trp
>WENV170329315
CESV01099748
452487
Bacteroidota
CCA
Trp
>WENV170329316
CESV01099749
452487
Bacteroidota
CCA
Trp
>WENV170328323
CESV01004850
272122
Bacteroidota
GTC
Asp
>WENV170328996
CESV01065760
655825
Bacteroidota
TTC
Glu
>WENV170329100
CESV01076092
655825
Bacteroidota
TTC
Glu
>WENV170328790
CESV01046458
280824
Bacteroidota
TGC
Ala
>WENV170328970
CESV01063532
241634
Bacteroidota
TGG
Pro
>WENV170329197
CESV01087556
241634
Bacteroidota
TGG
Pro
>WENV170328492
CESV01018807
278725
Bacteroidota
GTT
Asn
>WENV170330538
CESV01333038
655582
Bacteroidota
GCC
Gly
>WENV170328494
CESV01019396
277953
Bacteroidota
GTC
Asp
>WENV170328919
CESV01059600
277953
Bacteroidota
GTC
Asp
>WENV170328723
CESV01039942
86958
Bacteroidota
TGA
Ser
>WENV170329848
CESV01168668
86958
Bacteroidota
TGA
Ser
>WENV170330259
CESV01192176
86958
Bacteroidota
TGA
Ser
>WENV170329368
CESV01106723
271642
Bacteroidota
TCT
Arg
>WENV170329360
CESV01105201
30360
Bacteroidota
GGA
Ser
>WENV170329712
CESV01153573
240683
Bacteroidota
TGG
Pro
>WENV170328696
CESV01036663
275165
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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