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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170361803
CETM01028786
653934
Bacteroidota
TTC
Glu
>WENV170363580
CETM01171008
452741
Bacteroidota
TCC
Gly
>WENV170361681
CETM01022191
452487
Bacteroidota
CCA
Trp
>WENV170363408
CETM01157276
452487
Bacteroidota
CCA
Trp
>WENV170363909
CETM01194826
452487
Bacteroidota
CCA
Trp
>WENV170362976
CETM01116192
285374
Bacteroidota
GTC
Asp
>WENV170364323
CETM01213400
464575
Bacteroidota
GCC
Gly
>WENV170364501
CETM01311869
280666
Bacteroidota
GGC
Ala
>WENV170362980
CETM01116690
296387
Bacteroidota
CAT
Met
>WENV170363154
CETM01132071
240683
Bacteroidota
TGG
Pro
>WENV170362027
CETM01042408
275165
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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