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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170439599
CEUV01041223
275828
Alphaproteobacteria
GTC
Asp
>WENV170440373
CEUV01093153
275828
Alphaproteobacteria
GTC
Asp
>WENV170439522
CEUV01037748
180489
Alphaproteobacteria
TAG
Leu
>WENV170438973
CEUV01005774
273805
Alphaproteobacteria
ACG
Arg
>WENV170439084
CEUV01011045
273805
Alphaproteobacteria
ACG
Arg
>WENV170439097
CEUV01011931
277700
Alphaproteobacteria
GTG
His
>WENV170439321
CEUV01025607
274224
Alphaproteobacteria
CAT
Met
>WENV170439006
CEUV01007586
653532
Alphaproteobacteria
GTT
Asn
>WENV170439109
CEUV01012829
653532
Alphaproteobacteria
GTT
Asn
>WENV170440477
CEUV01101616
653532
Alphaproteobacteria
GTT
Asn
>WENV170440206
CEUV01078456
456498
Alphaproteobacteria
CAT
Met
>WENV170440668
CEUV01119849
275869
Alphaproteobacteria
CAT
Met
>WENV170439502
CEUV01036776
274142
Alphaproteobacteria
GAT
Ile
>WENV170441511
CEUV01192883
463649
Alphaproteobacteria
GAA
Phe
>WENV170439170
CEUV01015650
490965
Alphaproteobacteria
TGC
Ala
>WENV170439289
CEUV01023375
655271
Alphaproteobacteria
GGT
Thr
>WENV170439060
CEUV01010125
780582
Alphaproteobacteria
TCC
Gly
>WENV170441577
CEUV01225784
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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