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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170439026
CEUV01008551
273835
Bacteroidota
GTT
Asn
>WENV170439095
CEUV01011490
456728
Bacteroidota
CAT
Met
>WENV170440236
CEUV01082083
456414
Bacteroidota
GAA
Phe
>WENV170439996
CEUV01063729
452487
Bacteroidota
CCA
Trp
>WENV170440751
CEUV01126503
452487
Bacteroidota
CCA
Trp
>WENV170439267
CEUV01022024
272122
Bacteroidota
GTC
Asp
>WENV170439391
CEUV01029305
272122
Bacteroidota
GTC
Asp
>WENV170440883
CEUV01136712
272122
Bacteroidota
GTC
Asp
>WENV170438878
CEUV01000942
655825
Bacteroidota
TTC
Glu
>WENV170439794
CEUV01051979
459901
Bacteroidota
CCA
Trp
>WENV170439919
CEUV01058180
280824
Bacteroidota
TGC
Ala
>WENV170439108
CEUV01012679
241634
Bacteroidota
TGG
Pro
>WENV170440178
CEUV01075459
241634
Bacteroidota
TGG
Pro
>WENV170440430
CEUV01097422
278725
Bacteroidota
GTT
Asn
>WENV170438981
CEUV01006129
454306
Bacteroidota
TTG
Gln
>WENV170441012
CEUV01143217
277953
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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