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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170473674
CEVH01061564
655167
Alphaproteobacteria
TTC
Glu
>WENV170473580
CEVH01050076
273805
Alphaproteobacteria
ACG
Arg
>WENV170473627
CEVH01055674
112803
Alphaproteobacteria
CAG
Leu
>WENV170475079
CEVH01217082
655623
Alphaproteobacteria
GCC
Gly
>WENV170473540
CEVH01045807
218220
Alphaproteobacteria
>WENV170473970
CEVH01088076
277700
Alphaproteobacteria
GTG
His
>WENV170473487
CEVH01041652
452894
Alphaproteobacteria
CCA
Trp
>WENV170473433
CEVH01036618
653532
Alphaproteobacteria
GTT
Asn
>WENV170474394
CEVH01134640
454059
Alphaproteobacteria
TTT
Lys
>WENV170475022
CEVH01191791
113228
Alphaproteobacteria
CAG
Leu
>WENV170473490
CEVH01042126
490965
Alphaproteobacteria
TGC
Ala
>WENV170473467
CEVH01040490
655271
Alphaproteobacteria
GGT
Thr
>WENV170473756
CEVH01069554
655271
Alphaproteobacteria
GGT
Thr
>WENV170473413
CEVH01034842
270798
Alphaproteobacteria
CGG
Pro
>WENV170475158
CEVH01257454
46034
Alphaproteobacteria
CGA
Ser
>WENV170474370
CEVH01131814
275989
Alphaproteobacteria
CAT
Met
>WENV170474174
CEVH01108420
304024
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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