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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170473106
CEVH01005400
273835
Bacteroidota
GTT
Asn
>WENV170473499
CEVH01043277
273835
Bacteroidota
GTT
Asn
>WENV170474071
CEVH01098750
273835
Bacteroidota
GTT
Asn
>WENV170474829
CEVH01178345
273594
Bacteroidota
CAT
Met
>WENV170474003
CEVH01091184
456728
Bacteroidota
CAT
Met
>WENV170473423
CEVH01036167
271717
Bacteroidota
GTC
Asp
>WENV170473539
CEVH01045714
271717
Bacteroidota
GTC
Asp
>WENV170473099
CEVH01004720
456729
Bacteroidota
GAA
Phe
>WENV170473102
CEVH01005245
456414
Bacteroidota
GAA
Phe
>WENV170473733
CEVH01067598
456414
Bacteroidota
GAA
Phe
>WENV170474115
CEVH01102007
456414
Bacteroidota
GAA
Phe
>WENV170474339
CEVH01127807
456414
Bacteroidota
GAA
Phe
>WENV170473698
CEVH01064019
454409
Bacteroidota
GCC
Gly
>WENV170473213
CEVH01015284
452741
Bacteroidota
TCC
Gly
>WENV170473230
CEVH01016213
452741
Bacteroidota
TCC
Gly
>WENV170474116
CEVH01102028
452741
Bacteroidota
TCC
Gly
>WENV170473201
CEVH01013966
452487
Bacteroidota
CCA
Trp
>WENV170473557
CEVH01047124
452487
Bacteroidota
CCA
Trp
>WENV170473664
CEVH01060547
452487
Bacteroidota
CCA
Trp
>WENV170474592
CEVH01156208
452487
Bacteroidota
CCA
Trp
>WENV170474013
CEVH01092638
272122
Bacteroidota
GTC
Asp
>WENV170474388
CEVH01133956
272122
Bacteroidota
GTC
Asp
>WENV170474447
CEVH01140517
272122
Bacteroidota
GTC
Asp
>WENV170474246
CEVH01116644
655825
Bacteroidota
TTC
Glu
>WENV170474906
CEVH01185264
655825
Bacteroidota
TTC
Glu
>WENV170473118
CEVH01006368
459901
Bacteroidota
CCA
Trp
>WENV170473549
CEVH01046025
280824
Bacteroidota
TGC
Ala
>WENV170473144
CEVH01008338
278725
Bacteroidota
GTT
Asn
>WENV170473142
CEVH01008326
240683
Bacteroidota
TGG
Pro
>WENV170474132
CEVH01104793
240683
Bacteroidota
TGG
Pro
>WENV170474875
CEVH01182588
240683
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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