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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170475164
CEVH01259953
343348
Bacteroidota
GTG
His
>WENV170474003
CEVH01091184
512364
Bacteroidota
>WENV170473144
CEVH01008338
309637
Bacteroidota
GTT
Asn
>WENV170474013
CEVH01092638
308536
Bacteroidota
GTC
Asp
>WENV170474388
CEVH01133956
308536
Bacteroidota
GTC
Asp
>WENV170474447
CEVH01140517
308536
Bacteroidota
GTC
Asp
>WENV170474246
CEVH01116644
734200
Bacteroidota
TTC
Glu
>WENV170474906
CEVH01185264
734200
Bacteroidota
TTC
Glu
>WENV170473259
CEVH01018495
737952
Bacteroidota
TTC
Glu
>WENV170473708
CEVH01064638
737952
Bacteroidota
TTC
Glu
>WENV170473549
CEVH01046025
315085
Bacteroidota
TGC
Ala
>WENV170473423
CEVH01036167
308891
Bacteroidota
GTC
Asp
>WENV170473539
CEVH01045714
308891
Bacteroidota
GTC
Asp
>WENV170473142
CEVH01008326
272547
Bacteroidota
TGG
Pro
>WENV170474132
CEVH01104793
272547
Bacteroidota
TGG
Pro
>WENV170474875
CEVH01182588
272547
Bacteroidota
TGG
Pro
>WENV170474006
CEVH01091996
99792
Bacteroidota
TGA
Ser
>WENV170473201
CEVH01013966
512002
Bacteroidota
CCA
Trp
>WENV170473557
CEVH01047124
512002
Bacteroidota
CCA
Trp
>WENV170473664
CEVH01060547
512002
Bacteroidota
CCA
Trp
>WENV170474592
CEVH01156208
512002
Bacteroidota
CCA
Trp
>WENV170473102
CEVH01005245
514174
Bacteroidota
GAA
Phe
>WENV170473733
CEVH01067598
514174
Bacteroidota
GAA
Phe
>WENV170474115
CEVH01102007
514174
Bacteroidota
GAA
Phe
>WENV170474339
CEVH01127807
514174
Bacteroidota
GAA
Phe
>WENV170474683
CEVH01165801
874381
Bacteroidota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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