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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550474
CXVY01000005
510644
Actinomycetota
GGC
Ala
>WENV170550475
CXVY01000005
510644
Actinomycetota
GGC
Ala
>WENV170550478
CXVY01000006
305638
Actinomycetota
TAC
Val
>WENV170550480
CXVY01000007
306396
Actinomycetota
GGG
Pro
>WENV170550483
CXVY01000011
508588
Actinomycetota
CCT
Arg
>WENV170550484
CXVY01000016
306397
Actinomycetota
TCT
Arg
>WENV170550488
CXVY01000022
305625
Actinomycetota
CTT
Lys
>WENV170550489
CXVY01000026
35547
Actinomycetota
GAG
Leu
>WENV170550495
CXVY01000032
508587
Actinomycetota
GTG
His
>WENV170550497
CXVY01000037
871335
Actinomycetota
CCC
Gly
>WENV170550505
CXVY01000054
99421
Actinomycetota
TGA
Ser
>WENV170550504
CXVY01000054
99518
Actinomycetota
CGA
Ser
>WENV170550511
CXVY01000069
306398
Actinomycetota
CAA
Leu
>WENV170550510
CXVY01000069
258850
Actinomycetota
TAA
Leu
>WENV170550513
CXVY01000073
305610
Actinomycetota
CAT
Met
>WENV170550516
CXVY01000090
871334
Actinomycetota
TTG
Gln
>WENV170550519
CXVY01000120
306400
Actinomycetota
TGG
Pro
>WENV170550523
CXVY01000152
732524
Actinomycetota
CTG
Gln
>WENV170550524
CXVY01000155
305613
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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