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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170561077
CZCA01002659
514876
Bacillota
GAA
Phe
>WENV170561530
CZCA01012806
734245
Bacillota
GCC
Gly
>WENV170561043
CZCA01002500
736859
Bacillota
GCC
Gly
>WENV170561255
CZCA01005317
736859
Bacillota
GCC
Gly
>WENV170561574
CZCA01014260
743401
Bacillota
GCC
Gly
>WENV170560963
CZCA01001533
749818
Bacillota
CCC
Gly
>WENV170561351
CZCA01006759
312561
Bacillota
CCT
Arg
>WENV170560798
CZCA01000592
343837
Bacillota
CAT
Met
>WENV170561432
CZCA01009228
508470
Bacillota
GTT
Asn
>WENV170561517
CZCA01012653
334280
Bacillota
GAT
Ile
>WENV170561395
CZCA01007998
526857
Bacillota
CTT
Lys
>WENV170561385
CZCA01007651
547066
Bacillota
TAC
Val
>WENV170561719
CZCA01023094
514957
Bacillota
TGT
Thr
>WENV170561761
CZCA01027134
735211
Bacillota
GTT
Asn
>WENV170560926
CZCA01001240
515167
Bacillota
TAC
Val
>WENV170561349
CZCA01006716
515167
Bacillota
TAC
Val
>WENV170561084
CZCA01002695
308239
Bacillota
GAT
Ile
>WENV170561209
CZCA01004443
312747
Bacillota
GAT
Ile
>WENV170561198
CZCA01004181
333822
Bacillota
GTC
Asp
>WENV170561229
CZCA01004861
333822
Bacillota
GTC
Asp
>WENV170561058
CZCA01002546
734528
Bacillota
GCC
Gly
>WENV170561360
CZCA01007124
734528
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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