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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170561043
CZCA01002500
654064
Bacillota
GCC
Gly
>WENV170561255
CZCA01005317
654064
Bacillota
GCC
Gly
>WENV170560963
CZCA01001533
659449
Bacillota
CCC
Gly
>WENV170561517
CZCA01012653
306002
Bacillota
GAT
Ile
>WENV170560926
CZCA01001240
451367
Bacillota
TAC
Val
>WENV170561349
CZCA01006716
451367
Bacillota
TAC
Val
>WENV170561574
CZCA01014260
658733
Bacillota
GCC
Gly
>WENV170561385
CZCA01007651
460721
Bacillota
TAC
Val
>WENV170561432
CZCA01009228
482111
Bacillota
GTT
Asn
>WENV170561209
CZCA01004443
279706
Bacillota
GAT
Ile
>WENV170561058
CZCA01002546
658518
Bacillota
GCC
Gly
>WENV170561360
CZCA01007124
658518
Bacillota
GCC
Gly
>WENV170561084
CZCA01002695
281393
Bacillota
GAT
Ile
>WENV170561433
CZCA01009228
275589
Bacillota
CAT
Met
>WENV170561024
CZCA01002146
451375
Bacillota
GGC
Ala
>WENV170560809
CZCA01000626
451334
Bacillota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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