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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV001344
AY714590
273688
Betaproteobacteria
GAT
Ile
>ENV000690
AJ879780
276291
Betaproteobacteria
GAT
Ile
>ENV000692
AJ879782
276291
Betaproteobacteria
GAT
Ile
>ENV000694
AJ879785
276291
Betaproteobacteria
GAT
Ile
>ENV000696
AJ879786
276291
Betaproteobacteria
GAT
Ile
>ENV000698
AJ879787
276291
Betaproteobacteria
GAT
Ile
>ENV000700
AJ879788
276291
Betaproteobacteria
GAT
Ile
>ENV000702
AJ879789
276291
Betaproteobacteria
GAT
Ile
>ENV000706
AJ879791
276291
Betaproteobacteria
GAT
Ile
>ENV000708
AJ879792
276291
Betaproteobacteria
GAT
Ile
>ENV000710
AJ879793
276291
Betaproteobacteria
GAT
Ile
>ENV000712
AJ879794
276291
Betaproteobacteria
GAT
Ile
>ENV000714
AJ879795
276291
Betaproteobacteria
GAT
Ile
>ENV000716
AJ879796
276291
Betaproteobacteria
GAT
Ile
>ENV000718
AJ879797
276291
Betaproteobacteria
GAT
Ile
>ENV001052
AY484708
455720
Betaproteobacteria
TGC
Ala
>ENV001086
AY484727
455720
Betaproteobacteria
TGC
Ala
>ENV000024
AB213422
465310
Betaproteobacteria
TGC
Ala
>ENV000413
AF422535
465310
Betaproteobacteria
TGC
Ala
>ENV000419
AF422540
465310
Betaproteobacteria
TGC
Ala
>ENV000423
AF422542
465310
Betaproteobacteria
TGC
Ala
>ENV000425
AF422543
465310
Betaproteobacteria
TGC
Ala
>ENV000436
AF422552
465310
Betaproteobacteria
TGC
Ala
>ENV000442
AF422556
465310
Betaproteobacteria
TGC
Ala
>ENV000451
AF422561
465310
Betaproteobacteria
TGC
Ala
>ENV000467
AF422575
465310
Betaproteobacteria
TGC
Ala
>ENV000078
AB266369
452924
Betaproteobacteria
TGC
Ala
>ENV001044
AY458647
274722
Betaproteobacteria
GAT
Ile
>ENV003626
DQ009362
274722
Betaproteobacteria
GAT
Ile
>ENV003628
DQ009363
274722
Betaproteobacteria
GAT
Ile
>ENV003630
DQ009364
274722
Betaproteobacteria
GAT
Ile
>ENV003632
DQ009365
274722
Betaproteobacteria
GAT
Ile
>ENV000448
AF422560
297661
Betaproteobacteria
GAT
Ile
>ENV000453
AF422563
297661
Betaproteobacteria
GAT
Ile
>ENV004026
DQ190811
275880
Betaproteobacteria
GAT
Ile
>ENV004038
DQ190831
273251
Betaproteobacteria
GAT
Ile
>ENV000023
AB213422
289669
Betaproteobacteria
GAT
Ile
>ENV000412
AF422535
289669
Betaproteobacteria
GAT
Ile
>ENV000418
AF422540
289669
Betaproteobacteria
GAT
Ile
>ENV000422
AF422542
289669
Betaproteobacteria
GAT
Ile
>ENV000424
AF422543
289669
Betaproteobacteria
GAT
Ile
>ENV000426
AF422545
289669
Betaproteobacteria
GAT
Ile
>ENV000435
AF422552
289669
Betaproteobacteria
GAT
Ile
>ENV000441
AF422556
289669
Betaproteobacteria
GAT
Ile
>ENV000446
AF422559
289669
Betaproteobacteria
GAT
Ile
>ENV000466
AF422575
289669
Betaproteobacteria
GAT
Ile
>ENV001071
AY484720
289669
Betaproteobacteria
GAT
Ile
>ENV001075
AY484722
289669
Betaproteobacteria
GAT
Ile
>ENV003021
AY957958
289669
Betaproteobacteria
GAT
Ile
>ENV003029
AY957967
289669
Betaproteobacteria
GAT
Ile
>ENV005247
EF565162
289669
Betaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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