Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |
Identical group No.274722 (193 seq.) |
|
>W1711430697 |
MIJG01000001 |
Betaproteobacteria |
Herbaspirillum camelliae WT00C [MIJG] |
1302405 |
1302481 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1711430703 |
MIJG01000001 |
Betaproteobacteria |
Herbaspirillum camelliae WT00C [MIJG] |
676651 |
676575 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1711430708 |
MIJG01000001 |
Betaproteobacteria |
Herbaspirillum camelliae WT00C [MIJG] |
3605 |
3529 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1711765093 |
MUXB01000018 |
Betaproteobacteria |
Herbaspirillum sp. VT-16-41 [MUXB] |
2121 |
2197 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1712110289 |
NJGU01000026 |
Betaproteobacteria |
Herbaspirillum robiniae HZ10 [NJGU] |
3721 |
3645 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1712110326 |
NJGV01000018 |
Betaproteobacteria |
Herbaspirillum aquaticum [NJGV] |
3591 |
3515 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>C171021198 |
CP013136 |
Betaproteobacteria |
Herbaspirillum seropedicae AU14040 [CP013136] |
511030 |
511106 |
+ |
Ile |
GAT |
- |
¡û |
|
>C171021221 |
CP013136 |
Betaproteobacteria |
Herbaspirillum seropedicae AU14040 [CP013136] |
5337876 |
5337800 |
- |
Ile |
GAT |
- |
¡û |
|
>C171021226 |
CP013136 |
Betaproteobacteria |
Herbaspirillum seropedicae AU14040 [CP013136] |
4371806 |
4371730 |
- |
Ile |
GAT |
- |
¡û |
|
>C171085361 |
CP018845 |
Betaproteobacteria |
Herbaspirillum robiniae AA6 [CP018845] |
3704883 |
3704959 |
+ |
Ile |
GAT |
- |
¡û |
|
>C171085365 |
CP018845 |
Betaproteobacteria |
Herbaspirillum robiniae AA6 [CP018845] |
4301393 |
4301469 |
+ |
Ile |
GAT |
- |
¡û |
|
>C171085368 |
CP018845 |
Betaproteobacteria |
Herbaspirillum robiniae AA6 [CP018845] |
4643336 |
4643412 |
+ |
Ile |
GAT |
- |
¡û |
|
>W131046024 |
AMSA01000011 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os45 [AMSA] |
196120 |
196196 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W131046090 |
AMSB01000038 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os34 [AMSB] |
2124 |
2200 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W131062285 |
ANJR01000020 |
Betaproteobacteria |
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR] |
160028 |
160104 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W131062296 |
ANJR01000027 |
Betaproteobacteria |
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR] |
66502 |
66426 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>w020475 |
AAUX01000001 |
Betaproteobacteria |
Methylophilales bacterium HTCC2181 [AAUX] |
571067 |
571143 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV180033275 |
FTKF01231975 |
[FTKF] metagenome; soil |
|
133 |
57 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>W141003852 |
AEEC02000072 |
Betaproteobacteria |
Herbaspirillum frisingense GSF30 [AEEC] |
3340 |
3264 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV180113391 |
OAPQ01054771 |
[OAPQ] marine metagenome; ENVO: 00002149 |
|
104 |
28 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180114355 |
OAPS01006113 |
[OAPS] marine metagenome; sea water |
|
130 |
206 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180115545 |
OAPT01006555 |
[OAPT] marine metagenome; seawater |
|
802 |
726 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180214730 |
OBAP01055750 |
[OBAP] marine metagenome; ENVO:00002010 for 'seawater |
|
246 |
322 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180304428 |
OBJI01038043 |
[OBJI] soil metagenome; soil |
|
102 |
26 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180344468 |
OBLL01004365 |
[OBLL] soil metagenome; soil |
|
210 |
286 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180364241 |
OBNZ01165291 |
[OBNZ] marine metagenome; ENVO:00002010 |
|
134 |
210 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180387522 |
OBPF01005324 |
[OBPF] marine metagenome; Sterile flask |
|
583 |
659 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180387847 |
OBPG01003794 |
[OBPG] marine metagenome; Sterile flask |
|
178 |
102 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180389423 |
OBPJ01013930 |
[OBPJ] marine metagenome; seawater |
|
564 |
640 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180394637 |
OBPS01030186 |
[OBPS] marine metagenome; ENVO:00002010 seawater |
|
160 |
84 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180395479 |
OBPT01027273 |
[OBPT] marine metagenome; ENVO:00002010 seawater |
|
2 |
78 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180637064 |
OCRF01185751 |
[OCRF] marine metagenome; niskin bottle |
|
2 |
78 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180639031 |
OCRI01090785 |
[OCRI] marine metagenome; Sterile flask |
|
254 |
330 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181092817 |
OEBK01068207 |
[OEBK] marine metagenome; ENVO:00002010 for 'seawater |
|
18 |
94 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181315466 |
OFJP01000071 |
[OFJP] marine metagenome; seawater |
|
2547 |
2471 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>W141223396 |
BADF01000061 |
Betaproteobacteria |
Herbaspirillum sp. B39 [BADF] |
1939 |
2015 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W141223512 |
BADI01001150 |
Betaproteobacteria |
Herbaspirillum sp. B65 [BADI] |
6200 |
6124 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W141223539 |
BADJ01000803 |
Betaproteobacteria |
Herbaspirillum sp. B501 [BADJ] |
35993 |
35917 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W141241305 |
CAHF01000002 |
Betaproteobacteria |
Noviherbaspirillum massiliense JC206 [CAHF] |
3616 |
3540 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV182553548 |
OJCR01010395 |
[OJCR] seawater metagenome; Sea water |
|
1575 |
1499 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV182557263 |
OJDI01003893 |
[OJDI] seawater metagenome; Sea water |
|
2400 |
2324 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV182564856 |
OJEF01010645 |
[OJEF] seawater metagenome; Sea water |
|
254 |
330 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV182567861 |
OJEP01000899 |
[OJEP] seawater metagenome; Sea water |
|
254 |
330 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV182568366 |
OJET01005499 |
[OJET] seawater metagenome; Sea water |
|
416 |
340 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV182568747 |
OJEW01005871 |
[OJEW] seawater metagenome; Sea water |
|
246 |
322 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV182571220 |
OJFG01002038 |
[OJFG] seawater metagenome; Sea water |
|
2402 |
2326 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV182573789 |
OJFP01033924 |
[OJFP] seawater metagenome; Sea water |
|
346 |
270 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV182576481 |
OJFX01034729 |
[OJFX] seawater metagenome; Sea water |
|
509 |
433 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV182580693 |
OJGW01007807 |
[OJGW] seawater metagenome; Sea water |
|
254 |
330 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV182581449 |
OJGX01007186 |
[OJGX] seawater metagenome; Sea water |
|
2395 |
2319 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV182585292 |
OJHH01006724 |
[OJHH] seawater metagenome; Sea water |
|
2401 |
2325 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV182592601 |
OJIR01004981 |
[OJIR] seawater metagenome; Sea water |
|
254 |
330 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>W141258894 |
CBXX010000006 |
Betaproteobacteria |
Herbaspirillum sp. RV1423 [CBXX] |
260088 |
260164 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV183056469 |
OLHJ01000119 |
[OLHJ] seawater metagenome; Sea water |
|
3796 |
3720 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183060064 |
OLHW01007541 |
[OLHW] seawater metagenome; Sea water |
|
255 |
331 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183064976 |
OLII01006689 |
[OLII] seawater metagenome; Sea water |
|
2402 |
2326 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183730197 |
PJTR01003215 |
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment |
|
705 |
629 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183731105 |
PJTS01009527 |
[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment |
|
694 |
618 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183735209 |
PJUA01003097 |
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment |
|
1955 |
2031 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183735871 |
PJUB01006994 |
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment |
|
652 |
576 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183736524 |
PJUC01008816 |
[PJUC] soil metagenome; Soil enriched on filter paper |
|
683 |
607 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183743623 |
PJUJ01011544 |
[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment |
|
526 |
602 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>ENV08001427 |
ABMZ01010639 |
fish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease |
|
85 |
9 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>ENV08001432 |
ABMZ01017140 |
fish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease |
|
81 |
5 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>ENV08001444 |
ABNA01020232 |
fish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling |
|
82 |
6 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV170008321 |
ANMQ01000125 |
[ANMQ] wasp metagenome; Encarsia pergandiella (wasp) |
|
2342 |
2418 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170164964 |
CEON01048056 |
[CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
150 |
74 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170167624 |
CEOP01026122 |
[CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
452 |
528 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170271713 |
CERK01001199 |
[CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
59 |
135 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170274118 |
CERM01000232 |
[CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
930 |
854 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170285731 |
CERW01015547 |
[CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
845 |
921 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170488780 |
CEVP01013580 |
[CEVP] marine metagenome genome assembly TARA_150_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
878 |
802 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170495870 |
CEVS01004979 |
[CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
911 |
835 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170503805 |
CEVV01132655 |
[CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
125 |
201 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170535359 |
CEWP01050688 |
[CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
5 |
81 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170568152 |
FLMP01019579 |
[FLMP] seawater metagenome; seawater |
|
1129 |
1053 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170571392 |
FLOH01000147 |
[FLOH] marine metagenome; water |
|
106969 |
107045 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170600375 |
FUWD010122339 |
[FUWD] metagenome; unknown |
|
162 |
238 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170614287 |
FUWD012829338 |
[FUWD] metagenome; unknown |
|
466 |
542 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170620185 |
FUWD013027011 |
[FUWD] metagenome; unknown |
|
387 |
463 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170627134 |
FUWD013231544 |
[FUWD] metagenome; unknown |
|
2429 |
2353 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170628321 |
FUWD013244821 |
[FUWD] metagenome; unknown |
|
387 |
463 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170630596 |
FUWD013314871 |
[FUWD] metagenome; unknown |
|
10698 |
10622 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170659137 |
JXWR01000449 |
[JXWR] soil metagenome; rice field; ambient CO2 |
|
180 |
256 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170662751 |
JXWW01161962 |
[JXWW] soil metagenome; rice field; organic GM Plot |
|
262 |
338 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170949677 |
MEHZ011444375 |
[MEHZ] marine metagenome; marine surface water |
|
1 |
77 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170952734 |
MEHZ011611936 |
[MEHZ] marine metagenome; marine surface water |
|
924 |
848 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>C181071819 |
CP022736 |
Betaproteobacteria |
Herbaspirillum sp. meg3 [CP022736] |
50252 |
50328 |
+ |
Ile |
GAT |
- |
¡û |
|
>C181071824 |
CP022736 |
Betaproteobacteria |
Herbaspirillum sp. meg3 [CP022736] |
981279 |
981355 |
+ |
Ile |
GAT |
- |
¡û |
|
>C181071849 |
CP022736 |
Betaproteobacteria |
Herbaspirillum sp. meg3 [CP022736] |
4964660 |
4964584 |
- |
Ile |
GAT |
- |
¡û |
|
>C181163916 |
CP028324 |
Betaproteobacteria |
Pseudoduganella armeniaca ZMN-3 [CP028324] |
651983 |
652059 |
+ |
Ile |
GAT |
- |
¡û |
|
>C181163918 |
CP028324 |
Betaproteobacteria |
Pseudoduganella armeniaca ZMN-3 [CP028324] |
676676 |
676752 |
+ |
Ile |
GAT |
- |
¡û |
|
>C181163920 |
CP028324 |
Betaproteobacteria |
Pseudoduganella armeniaca ZMN-3 [CP028324] |
688204 |
688280 |
+ |
Ile |
GAT |
- |
¡û |
|
>C181163923 |
CP028324 |
Betaproteobacteria |
Pseudoduganella armeniaca ZMN-3 [CP028324] |
1364570 |
1364646 |
+ |
Ile |
GAT |
- |
¡û |
|
>C181163927 |
CP028324 |
Betaproteobacteria |
Pseudoduganella armeniaca ZMN-3 [CP028324] |
2333165 |
2333241 |
+ |
Ile |
GAT |
- |
¡û |
|
>C181163950 |
CP028324 |
Betaproteobacteria |
Pseudoduganella armeniaca ZMN-3 [CP028324] |
5726745 |
5726669 |
- |
Ile |
GAT |
- |
¡û |
|
>C181187747 |
CP030092 |
Betaproteobacteria |
Massilia sp. YMA4 [CP030092] |
5594045 |
5594121 |
+ |
Ile |
GAT |
- |
¡û |
|
>C181187749 |
CP030092 |
Betaproteobacteria |
Massilia sp. YMA4 [CP030092] |
5618850 |
5618926 |
+ |
Ile |
GAT |
- |
¡û |
|
>C181187762 |
CP030092 |
Betaproteobacteria |
Massilia sp. YMA4 [CP030092] |
4443269 |
4443193 |
- |
Ile |
GAT |
- |
¡û |
|
>C181187764 |
CP030092 |
Betaproteobacteria |
Massilia sp. YMA4 [CP030092] |
4432580 |
4432504 |
- |
Ile |
GAT |
- |
¡û |
|
>C181187766 |
CP030092 |
Betaproteobacteria |
Massilia sp. YMA4 [CP030092] |
4407671 |
4407595 |
- |
Ile |
GAT |
- |
¡û |
|
>C181187769 |
CP030092 |
Betaproteobacteria |
Massilia sp. YMA4 [CP030092] |
3761411 |
3761335 |
- |
Ile |
GAT |
- |
¡û |
|
>C181187772 |
CP030092 |
Betaproteobacteria |
Massilia sp. YMA4 [CP030092] |
2775115 |
2775039 |
- |
Ile |
GAT |
- |
¡û |
|
>C191029329 |
CP024996 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] |
548664 |
548740 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191029352 |
CP024996 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] |
5530593 |
5530517 |
- |
Ile |
GAT |
- |
¡û |
|
>C191029357 |
CP024996 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996] |
4608088 |
4608012 |
- |
Ile |
GAT |
- |
¡û |
|
>C191124226 |
CP034395 |
Betaproteobacteria |
Herbaspirillum seropedicae AU13965 [CP034395] |
507301 |
507377 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191124249 |
CP034395 |
Betaproteobacteria |
Herbaspirillum seropedicae AU13965 [CP034395] |
5271628 |
5271552 |
- |
Ile |
GAT |
- |
¡û |
|
>C191124254 |
CP034395 |
Betaproteobacteria |
Herbaspirillum seropedicae AU13965 [CP034395] |
4313263 |
4313187 |
- |
Ile |
GAT |
- |
¡û |
|
>C191138931 |
CP035311 |
Betaproteobacteria |
Janthinobacterium sp. 17J80-10 [CP035311] |
3882502 |
3882426 |
- |
Ile |
GAT |
- |
¡û |
|
>C191138934 |
CP035311 |
Betaproteobacteria |
Janthinobacterium sp. 17J80-10 [CP035311] |
3186707 |
3186631 |
- |
Ile |
GAT |
- |
¡û |
|
>C191138937 |
CP035311 |
Betaproteobacteria |
Janthinobacterium sp. 17J80-10 [CP035311] |
2791180 |
2791104 |
- |
Ile |
GAT |
- |
¡û |
|
>C191150802 |
CP036401 |
Betaproteobacteria |
Pseudoduganella albidiflava DSM 17472 [CP036401] |
7353528 |
7353604 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191150804 |
CP036401 |
Betaproteobacteria |
Pseudoduganella albidiflava DSM 17472 [CP036401] |
7371930 |
7372006 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191150816 |
CP036401 |
Betaproteobacteria |
Pseudoduganella albidiflava DSM 17472 [CP036401] |
6007773 |
6007697 |
- |
Ile |
GAT |
- |
¡û |
|
>C191150818 |
CP036401 |
Betaproteobacteria |
Pseudoduganella albidiflava DSM 17472 [CP036401] |
5996479 |
5996403 |
- |
Ile |
GAT |
- |
¡û |
|
>C191150820 |
CP036401 |
Betaproteobacteria |
Pseudoduganella albidiflava DSM 17472 [CP036401] |
5970576 |
5970500 |
- |
Ile |
GAT |
- |
¡û |
|
>C191150823 |
CP036401 |
Betaproteobacteria |
Pseudoduganella albidiflava DSM 17472 [CP036401] |
5318378 |
5318302 |
- |
Ile |
GAT |
- |
¡û |
|
>C191150825 |
CP036401 |
Betaproteobacteria |
Pseudoduganella albidiflava DSM 17472 [CP036401] |
4946123 |
4946047 |
- |
Ile |
GAT |
- |
¡û |
|
>C191150833 |
CP036401 |
Betaproteobacteria |
Pseudoduganella albidiflava DSM 17472 [CP036401] |
3996626 |
3996550 |
- |
Ile |
GAT |
- |
¡û |
|
>C191156635 |
CP037993 |
Betaproteobacteria |
Herbaspirillum huttiense NFYY 53159 [CP037993] |
5600779 |
5600703 |
- |
Ile |
GAT |
- |
¡û |
|
>C191156637 |
CP037993 |
Betaproteobacteria |
Herbaspirillum huttiense NFYY 53159 [CP037993] |
5595016 |
5594940 |
- |
Ile |
GAT |
- |
¡û |
|
>C191156642 |
CP037993 |
Betaproteobacteria |
Herbaspirillum huttiense NFYY 53159 [CP037993] |
4465945 |
4465869 |
- |
Ile |
GAT |
- |
¡û |
|
>C191156644 |
CP037993 |
Betaproteobacteria |
Herbaspirillum huttiense NFYY 53159 [CP037993] |
4460182 |
4460106 |
- |
Ile |
GAT |
- |
¡û |
|
>C191157308 |
CP038026 |
Betaproteobacteria |
Pseudoduganella plicata DSM 17505 [CP038026] |
4472125 |
4472201 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191157310 |
CP038026 |
Betaproteobacteria |
Pseudoduganella plicata DSM 17505 [CP038026] |
4497053 |
4497129 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191157312 |
CP038026 |
Betaproteobacteria |
Pseudoduganella plicata DSM 17505 [CP038026] |
4516226 |
4516302 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191157315 |
CP038026 |
Betaproteobacteria |
Pseudoduganella plicata DSM 17505 [CP038026] |
5406378 |
5406454 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191157338 |
CP038026 |
Betaproteobacteria |
Pseudoduganella plicata DSM 17505 [CP038026] |
3422146 |
3422070 |
- |
Ile |
GAT |
- |
¡û |
|
>C191157340 |
CP038026 |
Betaproteobacteria |
Pseudoduganella plicata DSM 17505 [CP038026] |
3410671 |
3410595 |
- |
Ile |
GAT |
- |
¡û |
|
>C191157342 |
CP038026 |
Betaproteobacteria |
Pseudoduganella plicata DSM 17505 [CP038026] |
3383649 |
3383573 |
- |
Ile |
GAT |
- |
¡û |
|
>C191173950 |
CP040017 |
Betaproteobacteria |
Pseudoduganella umbonata DSMZ 26121 [CP040017] |
478926 |
479002 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191173972 |
CP040017 |
Betaproteobacteria |
Pseudoduganella umbonata DSMZ 26121 [CP040017] |
5800632 |
5800708 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191173974 |
CP040017 |
Betaproteobacteria |
Pseudoduganella umbonata DSMZ 26121 [CP040017] |
5811959 |
5812035 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191173976 |
CP040017 |
Betaproteobacteria |
Pseudoduganella umbonata DSMZ 26121 [CP040017] |
5838667 |
5838743 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191173979 |
CP040017 |
Betaproteobacteria |
Pseudoduganella umbonata DSMZ 26121 [CP040017] |
6424074 |
6424150 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191173981 |
CP040017 |
Betaproteobacteria |
Pseudoduganella umbonata DSMZ 26121 [CP040017] |
6787780 |
6787856 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191173983 |
CP040017 |
Betaproteobacteria |
Pseudoduganella umbonata DSMZ 26121 [CP040017] |
6800513 |
6800589 |
+ |
Ile |
GAT |
- |
¡û |
|
>C191173999 |
CP040017 |
Betaproteobacteria |
Pseudoduganella umbonata DSMZ 26121 [CP040017] |
4504890 |
4504814 |
- |
Ile |
GAT |
- |
¡û |
|
>C191174001 |
CP040017 |
Betaproteobacteria |
Pseudoduganella umbonata DSMZ 26121 [CP040017] |
4492459 |
4492383 |
- |
Ile |
GAT |
- |
¡û |
|
>WENV002286 |
AACY020064250 |
Marine microbial communities from Global Ocean Sampling (GOS) |
|
1037 |
1113 |
+ |
Ile |
GAT |
[ENA] |
|
|
>W1910577884 |
JUGD01000052 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os38 [JUGD] |
3640 |
3564 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1910578309 |
JWJC01000017 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans Os44 [JWJC] |
208402 |
208478 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1911802720 |
QYUN01000002 |
Betaproteobacteria |
Noviherbaspirillum cavernae K2R10-39 [QYUN] |
393059 |
393135 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1911802751 |
QYUN01000002 |
Betaproteobacteria |
Noviherbaspirillum cavernae K2R10-39 [QYUN] |
3299893 |
3299817 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1911802768 |
QYUN01000003 |
Betaproteobacteria |
Noviherbaspirillum cavernae K2R10-39 [QYUN] |
618192 |
618268 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1911802882 |
QYUQ01000002 |
Betaproteobacteria |
Noviherbaspirillum sedimenti K1S02-23 [QYUQ] |
306420 |
306496 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1911802913 |
QYUQ01000002 |
Betaproteobacteria |
Noviherbaspirillum sedimenti K1S02-23 [QYUQ] |
2638991 |
2638915 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1911802916 |
QYUQ01000002 |
Betaproteobacteria |
Noviherbaspirillum sedimenti K1S02-23 [QYUQ] |
1958103 |
1958027 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1911802931 |
QYUQ01000004 |
Betaproteobacteria |
Noviherbaspirillum sedimenti K1S02-23 [QYUQ] |
5011 |
4935 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>SRA1001505 |
SRR001067.37653 |
Tilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155) |
|
85 |
9 |
- |
Ile |
GAT |
[SRA] |
|
|
>SRA1001509 |
SRR001067.49529 |
Tilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155) |
|
81 |
5 |
- |
Ile |
GAT |
[SRA] |
|
|
>SRA1001534 |
SRR001068.77862 |
Tilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling (SRP000156) |
|
82 |
6 |
- |
Ile |
GAT |
[SRA] |
|
|
>W1810194074 |
PKOI01000040 |
Betaproteobacteria |
Herbaspirillum sp. BH-1 [PKOI] |
1955 |
2031 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1810887540 |
QUQN01000010 |
Betaproteobacteria |
Herbaspirillum sp. 3R-3a1 [QUQN] |
2104 |
2180 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>C151082348 |
CP011409 |
Betaproteobacteria |
Herbaspirillum hiltneri N3 [CP011409] |
440277 |
440353 |
+ |
Ile |
GAT |
- |
¡û |
|
>C151082375 |
CP011409 |
Betaproteobacteria |
Herbaspirillum hiltneri N3 [CP011409] |
4307972 |
4307896 |
- |
Ile |
GAT |
- |
¡û |
|
>C151087561 |
CP011930 |
Betaproteobacteria |
Herbaspirillum seropedicae Z67 [CP011930] |
521295 |
521371 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C151087584 |
CP011930 |
Betaproteobacteria |
Herbaspirillum seropedicae Z67 [CP011930] |
5427608 |
5427532 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C151087589 |
CP011930 |
Betaproteobacteria |
Herbaspirillum seropedicae Z67 [CP011930] |
4442369 |
4442293 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C151092610 |
CP012201 |
Betaproteobacteria |
Massilia sp. NR 4-1 [CP012201] |
5007740 |
5007816 |
+ |
Ile |
GAT |
- |
¡û |
|
>C151092612 |
CP012201 |
Betaproteobacteria |
Massilia sp. NR 4-1 [CP012201] |
5015658 |
5015734 |
+ |
Ile |
GAT |
- |
¡û |
|
>C151092614 |
CP012201 |
Betaproteobacteria |
Massilia sp. NR 4-1 [CP012201] |
5021812 |
5021888 |
+ |
Ile |
GAT |
- |
¡û |
|
>C151092633 |
CP012201 |
Betaproteobacteria |
Massilia sp. NR 4-1 [CP012201] |
3730261 |
3730185 |
- |
Ile |
GAT |
- |
¡û |
|
>C151092635 |
CP012201 |
Betaproteobacteria |
Massilia sp. NR 4-1 [CP012201] |
3704914 |
3704838 |
- |
Ile |
GAT |
- |
¡û |
|
>C151092637 |
CP012201 |
Betaproteobacteria |
Massilia sp. NR 4-1 [CP012201] |
3677606 |
3677530 |
- |
Ile |
GAT |
- |
¡û |
|
>C151092640 |
CP012201 |
Betaproteobacteria |
Massilia sp. NR 4-1 [CP012201] |
2827099 |
2827023 |
- |
Ile |
GAT |
- |
¡û |
|
>WENV031499 |
AACY021372787 |
Marine microbial communities from Global Ocean Sampling (GOS) |
|
721 |
645 |
- |
Ile |
GAT |
[ENA] |
|
|
>SRA1046226 |
SRR035093.257246 |
454 Sequencing (SRP001814) |
|
80 |
156 |
+ |
Ile |
GAT |
[SRA] |
|
|
>SRA1046955 |
SRR035093.425556 |
454 Sequencing (SRP001814) |
|
191 |
267 |
+ |
Ile |
GAT |
[SRA] |
|
|
>C10107797 |
CP002039 |
Betaproteobacteria |
Herbaspirillum seropedicae SmR1 [CP002039] |
521296 |
521372 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C10107818 |
CP002039 |
Betaproteobacteria |
Herbaspirillum seropedicae SmR1 [CP002039] |
5431774 |
5431698 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C10107823 |
CP002039 |
Betaproteobacteria |
Herbaspirillum seropedicae SmR1 [CP002039] |
4446483 |
4446407 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>W1511683801 |
LFLS01000071 |
Betaproteobacteria |
Herbaspirillum autotrophicum IAM 14942 [LFLS] |
1855 |
1931 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1511683848 |
LFLT01000090 |
Betaproteobacteria |
Herbaspirillum chlorophenolicum CPW301 [LFLT] |
3663 |
3587 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1511683895 |
LFLU01000036 |
Betaproteobacteria |
Herbaspirillum rhizosphaerae UMS-37 [LFLU] |
3608 |
3532 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>C161060434 |
CP013737 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans M1 [CP013737] |
546084 |
546160 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C161060457 |
CP013737 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans M1 [CP013737] |
5526177 |
5526101 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C161060462 |
CP013737 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans M1 [CP013737] |
4524411 |
4524335 |
- |
Ile |
GAT |
[Ensembl] |
¡û |
|
>W121061958 |
AJHH01000137 |
Betaproteobacteria |
Herbaspirillum lusitanum P6-12 [AJHH] |
2602 |
2678 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W121068724 |
AJVC01000004 |
Betaproteobacteria |
Herbaspirillum sp. GW103 [AJVC] |
812253 |
812177 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W121068736 |
AJVC01000006 |
Betaproteobacteria |
Herbaspirillum sp. GW103 [AJVC] |
305827 |
305751 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W121085147 |
AKJA01000016 |
Betaproteobacteria |
Herbaspirillum sp. YR522 [AKJA] |
3945 |
3869 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W121086402 |
AKJW01000112 |
Betaproteobacteria |
Herbaspirillum sp. CF444 [AKJW] |
3693 |
3617 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1610070454 |
BCTG01000073 |
Betaproteobacteria |
Herbaspirillum chlorophenolicum NBRC 102525 [BCTG] |
121 |
197 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1610071871 |
BCUJ01000067 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] |
1251 |
1327 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>ENV001044 |
AY458647 |
Environmental sample from ENV division of INSDC |
|
52999 |
52923 |
- |
Ile |
GAT |
[ENA] |
|
|
>ENV003626 |
DQ009362 |
Environmental sample from ENV division of INSDC |
|
1597 |
1673 |
+ |
Ile |
GAT |
[ENA] |
|
|
>ENV003628 |
DQ009363 |
Environmental sample from ENV division of INSDC |
|
1597 |
1673 |
+ |
Ile |
GAT |
[ENA] |
|
|
>ENV003630 |
DQ009364 |
Environmental sample from ENV division of INSDC |
|
1597 |
1673 |
+ |
Ile |
GAT |
[ENA] |
|
|
>ENV003632 |
DQ009365 |
Environmental sample from ENV division of INSDC |
|
139 |
215 |
+ |
Ile |
GAT |
[ENA] |
|
|
>W1710067827 |
BCTG01000073 |
Betaproteobacteria |
Herbaspirillum chlorophenolicum NBRC 102525 [BCTG] |
121 |
197 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1710069073 |
BCUJ01000067 |
Betaproteobacteria |
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ] |
1251 |
1327 |
+ |
Ile |
GAT |
[ENA] |
¡û |
Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |