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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180012117
FLSK01192251
282406
Actinomycetota
GGG
Pro
>WENV180012334
FLSK01376378
282406
Actinomycetota
GGG
Pro
>WENV180011405
FLSK01003017
72982
Actinomycetota
GAG
Leu
>WENV180011517
FLSK01003400
457500
Actinomycetota
CTT
Lys
>WENV180012069
FLSK01159288
457500
Actinomycetota
CTT
Lys
>WENV180012278
FLSK01321969
457500
Actinomycetota
CTT
Lys
>WENV180012370
FLSK01376791
457500
Actinomycetota
CTT
Lys
>WENV180011953
FLSK01110692
87459
Actinomycetota
GGA
Ser
>WENV180011531
FLSK01003549
455606
Actinomycetota
CGC
Ala
>WENV180012080
FLSK01164706
455606
Actinomycetota
CGC
Ala
>WENV180011584
FLSK01006244
463360
Actinomycetota
CTC
Glu
>WENV180011585
FLSK01006244
463360
Actinomycetota
CTC
Glu
>WENV180011586
FLSK01006244
463360
Actinomycetota
CTC
Glu
>WENV180012153
FLSK01218814
463360
Actinomycetota
CTC
Glu
>WENV180012154
FLSK01218814
463360
Actinomycetota
CTC
Glu
>WENV180012155
FLSK01218814
463360
Actinomycetota
CTC
Glu
>WENV180011616
FLSK01008944
458839
Actinomycetota
CGT
Thr
>WENV180011709
FLSK01026437
458839
Actinomycetota
CGT
Thr
>WENV180012110
FLSK01189542
458839
Actinomycetota
CGT
Thr
>WENV180012163
FLSK01222384
458840
Actinomycetota
CAC
Val
>WENV180012236
FLSK01286509
653655
Actinomycetota
CAC
Val
>WENV180011771
FLSK01042121
452069
Actinomycetota
TGC
Ala
>WENV180011248
FLSK01000316
457671
Actinomycetota
GGC
Ala
>WENV180011887
FLSK01079825
457671
Actinomycetota
GGC
Ala
>WENV180012151
FLSK01217692
457671
Actinomycetota
GGC
Ala
>WENV180012237
FLSK01287009
452232
Actinomycetota
CGT
Thr
>WENV180011770
FLSK01042121
271000
Actinomycetota
GAT
Ile
>WENV180012033
FLSK01140518
274000
Actinomycetota
CAT
Met
>WENV180011605
FLSK01007908
457496
Actinomycetota
GCC
Gly
>WENV180011699
FLSK01024312
457496
Actinomycetota
GCC
Gly
>WENV180011703
FLSK01025253
457496
Actinomycetota
GCC
Gly
>WENV180011518
FLSK01003400
457496
Actinomycetota
GCC
Gly
>WENV180011216
FLSK01000009
457499
Actinomycetota
CTC
Glu
>WENV180011520
FLSK01003400
457499
Actinomycetota
CTC
Glu
>WENV180012015
FLSK01130733
457499
Actinomycetota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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