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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180011216
FLSK01000009
512737
Actinomycetota
CTC
Glu
>WENV180011248
FLSK01000316
511565
Actinomycetota
GGC
Ala
>WENV180011259
FLSK01000442
53427
Actinomycetota
TGA
Ser
>WENV180011261
FLSK01000490
53428
Actinomycetota
CGA
Ser
>WENV180011305
FLSK01001284
128286
Actinomycetota
CAG
Leu
>WENV180011517
FLSK01003400
512735
Actinomycetota
CTT
Lys
>WENV180011518
FLSK01003400
512736
Actinomycetota
GCC
Gly
>WENV180011520
FLSK01003400
512737
Actinomycetota
CTC
Glu
>WENV180011531
FLSK01003549
509379
Actinomycetota
CGC
Ala
>WENV180011570
FLSK01005437
512739
Actinomycetota
TCT
Arg
>WENV180011584
FLSK01006244
512761
Actinomycetota
CTC
Glu
>WENV180011585
FLSK01006244
512761
Actinomycetota
CTC
Glu
>WENV180011586
FLSK01006244
512761
Actinomycetota
CTC
Glu
>WENV180011593
FLSK01006510
735008
Actinomycetota
TTT
Lys
>WENV180011605
FLSK01007908
512736
Actinomycetota
GCC
Gly
>WENV180011616
FLSK01008944
511557
Actinomycetota
CGT
Thr
>WENV180011626
FLSK01009724
310015
Actinomycetota
TAA
Leu
>WENV180011635
FLSK01011358
512762
Actinomycetota
TTC
Glu
>WENV180011640
FLSK01011563
128286
Actinomycetota
CAG
Leu
>WENV180011678
FLSK01019699
310013
Actinomycetota
TGG
Pro
>WENV180011690
FLSK01021599
735007
Actinomycetota
GTT
Asn
>WENV180011692
FLSK01022416
14964
Actinomycetota
GCT
Ser
>WENV180011699
FLSK01024312
512736
Actinomycetota
GCC
Gly
>WENV180011703
FLSK01025253
512736
Actinomycetota
GCC
Gly
>WENV180011709
FLSK01026437
511557
Actinomycetota
CGT
Thr
>WENV180011737
FLSK01032857
53427
Actinomycetota
TGA
Ser
>WENV180011738
FLSK01032857
14964
Actinomycetota
GCT
Ser
>WENV180011759
FLSK01039964
872288
Actinomycetota
TTG
Gln
>WENV180011765
FLSK01040961
128286
Actinomycetota
CAG
Leu
>WENV180011829
FLSK01053106
735007
Actinomycetota
GTT
Asn
>WENV180011874
FLSK01075270
25419
Actinomycetota
GCT
Ser
>WENV180011887
FLSK01079825
511565
Actinomycetota
GGC
Ala
>WENV180011898
FLSK01082951
310016
Actinomycetota
GAT
Ile
>WENV180011935
FLSK01099055
310013
Actinomycetota
TGG
Pro
>WENV180011950
FLSK01109274
310015
Actinomycetota
TAA
Leu
>WENV180011953
FLSK01110692
99374
Actinomycetota
GGA
Ser
>WENV180012015
FLSK01130733
512737
Actinomycetota
CTC
Glu
>WENV180012069
FLSK01159288
512735
Actinomycetota
CTT
Lys
>WENV180012080
FLSK01164706
509379
Actinomycetota
CGC
Ala
>WENV180012110
FLSK01189542
511557
Actinomycetota
CGT
Thr
>WENV180012117
FLSK01192251
309953
Actinomycetota
GGG
Pro
>WENV180012133
FLSK01203412
872288
Actinomycetota
TTG
Gln
>WENV180012137
FLSK01205585
310015
Actinomycetota
TAA
Leu
>WENV180012151
FLSK01217692
511565
Actinomycetota
GGC
Ala
>WENV180012153
FLSK01218814
512761
Actinomycetota
CTC
Glu
>WENV180012154
FLSK01218814
512761
Actinomycetota
CTC
Glu
>WENV180012155
FLSK01218814
512761
Actinomycetota
CTC
Glu
>WENV180012163
FLSK01222384
512668
Actinomycetota
CAC
Val
>WENV180012166
FLSK01223609
312485
Actinomycetota
ACG
Arg
>WENV180012228
FLSK01281190
512739
Actinomycetota
TCT
Arg
>WENV180012236
FLSK01286509
732306
Actinomycetota
CAC
Val
>WENV180012237
FLSK01287009
508673
Actinomycetota
CGT
Thr
>WENV180012267
FLSK01315776
310013
Actinomycetota
TGG
Pro
>WENV180012278
FLSK01321969
512735
Actinomycetota
CTT
Lys
>WENV180012322
FLSK01364932
310016
Actinomycetota
GAT
Ile
>WENV180012334
FLSK01376378
309953
Actinomycetota
GGG
Pro
>WENV180012335
FLSK01376380
53426
Actinomycetota
GAG
Leu
>WENV180012337
FLSK01376408
205000
Actinomycetota
GTA
Tyr
>WENV180012338
FLSK01376409
310016
Actinomycetota
GAT
Ile
>WENV180012370
FLSK01376791
512735
Actinomycetota
CTT
Lys
>WENV180012389
FLSK01376860
309994
Actinomycetota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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