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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180020293
FTCZ01001250
780809
Alphaproteobacteria
CTG
Gln
>WENV180020413
FTCZ01003203
273438
Alphaproteobacteria
TGG
Pro
>WENV180020380
FTCZ01002410
464602
Alphaproteobacteria
TTC
Glu
>WENV180020612
FTCZ01007279
464602
Alphaproteobacteria
TTC
Glu
>WENV180020393
FTCZ01002715
113518
Alphaproteobacteria
CAG
Leu
>WENV180020478
FTCZ01004534
113518
Alphaproteobacteria
CAG
Leu
>WENV180020533
FTCZ01005642
282797
Alphaproteobacteria
GTG
His
>WENV180020625
FTCZ01007602
282797
Alphaproteobacteria
GTG
His
>WENV180020329
FTCZ01001600
653784
Alphaproteobacteria
CAT
Met
>WENV180020366
FTCZ01002086
180423
Alphaproteobacteria
CAA
Leu
>WENV180020407
FTCZ01003066
180412
Alphaproteobacteria
GTA
Tyr
>WENV180020571
FTCZ01006300
457364
Alphaproteobacteria
TGT
Thr
>WENV180020408
FTCZ01003066
780044
Alphaproteobacteria
TCC
Gly
>WENV180020493
FTCZ01004775
465568
Alphaproteobacteria
GGC
Ala
>WENV180020534
FTCZ01005643
782892
Alphaproteobacteria
TTG
Gln
>WENV180020368
FTCZ01002131
46091
Alphaproteobacteria
CGA
Ser
>WENV180020302
FTCZ01001304
451742
Alphaproteobacteria
GGC
Ala
>WENV180020563
FTCZ01006155
451742
Alphaproteobacteria
GGC
Ala
>WENV180020668
FTCZ01008120
13460
Alphaproteobacteria
GCT
Ser
>WENV180020362
FTCZ01002045
654997
Alphaproteobacteria
CTC
Glu
>WENV180020259
FTCZ01000822
452624
Alphaproteobacteria
CGT
Thr
>WENV180020440
FTCZ01003975
273450
Alphaproteobacteria
TCT
Arg
>WENV180020445
FTCZ01003996
654017
Alphaproteobacteria
TGT
Thr
>WENV180020452
FTCZ01004141
654017
Alphaproteobacteria
TGT
Thr
>WENV180020604
FTCZ01007137
654017
Alphaproteobacteria
TGT
Thr
>WENV180020370
FTCZ01002187
182088
Alphaproteobacteria
TAG
Leu
>WENV180020379
FTCZ01002313
453993
Alphaproteobacteria
GAA
Phe
>WENV180020673
FTCZ01008182
453993
Alphaproteobacteria
GAA
Phe
>WENV180020387
FTCZ01002580
281909
Alphaproteobacteria
ACG
Arg
>WENV180020294
FTCZ01001254
113126
Alphaproteobacteria
CAG
Leu
>WENV180020383
FTCZ01002510
274236
Alphaproteobacteria
TCT
Arg
>WENV180020656
FTCZ01007946
661074
Alphaproteobacteria
GCC
Gly
>WENV180020662
FTCZ01008030
112838
Alphaproteobacteria
GAG
Leu
>WENV180020330
FTCZ01001615
181042
Alphaproteobacteria
GAG
Leu
>WENV180020465
FTCZ01004321
181042
Alphaproteobacteria
GAG
Leu
>WENV180020363
FTCZ01002059
454508
Alphaproteobacteria
CGC
Ala
>WENV180020670
FTCZ01008167
46093
Alphaproteobacteria
GGA
Ser
>WENV180020490
FTCZ01004757
654998
Alphaproteobacteria
GCC
Gly
>WENV180020667
FTCZ01008085
45995
Alphaproteobacteria
TGA
Ser
>WENV180020279
FTCZ01000919
455370
Alphaproteobacteria
CTT
Lys
>WENV180020587
FTCZ01006684
283492
Alphaproteobacteria
CGG
Pro
>WENV180020499
FTCZ01004947
273364
Alphaproteobacteria
CAT
Met
>WENV180020514
FTCZ01005187
457351
Alphaproteobacteria
TTC
Glu
>WENV180020528
FTCZ01005484
454318
Alphaproteobacteria
GGC
Ala
>WENV180020469
FTCZ01004413
274003
Alphaproteobacteria
CGG
Pro
>WENV180020295
FTCZ01001293
655105
Alphaproteobacteria
TGT
Thr
>WENV180020488
FTCZ01004739
655105
Alphaproteobacteria
TGT
Thr
>WENV180020401
FTCZ01002947
780039
Alphaproteobacteria
GCA
Cys
>WENV180020513
FTCZ01005168
780039
Alphaproteobacteria
GCA
Cys
>WENV180020579
FTCZ01006532
780039
Alphaproteobacteria
GCA
Cys
>WENV180020412
FTCZ01003164
464601
Alphaproteobacteria
CGT
Thr
>WENV180020480
FTCZ01004544
454433
Alphaproteobacteria
TGT
Thr
>WENV180020371
FTCZ01002187
659893
Alphaproteobacteria
TAC
Val
>WENV180020650
FTCZ01007843
655013
Alphaproteobacteria
TGT
Thr
>WENV180020654
FTCZ01007923
454588
Alphaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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