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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170655411
JTFN01029858
664335
Alphaproteobacteria
TTC
Glu
>WENV170655511
JTFN01040070
664335
Alphaproteobacteria
TTC
Glu
>WENV170655582
JTFN01048231
664335
Alphaproteobacteria
TTC
Glu
>WENV170655765
JTFN01070544
664335
Alphaproteobacteria
TTC
Glu
>WENV170655385
JTFN01027581
454566
Alphaproteobacteria
GAA
Phe
>WENV170656075
JTFN01126207
457318
Alphaproteobacteria
CGT
Thr
>WENV170655590
JTFN01048948
154277
Alphaproteobacteria
GTA
Tyr
>WENV170655075
JTFN01004127
46237
Alphaproteobacteria
TGA
Ser
>WENV170655607
JTFN01051383
46237
Alphaproteobacteria
TGA
Ser
>WENV170655772
JTFN01071463
46237
Alphaproteobacteria
TGA
Ser
>WENV170655903
JTFN01093685
46237
Alphaproteobacteria
TGA
Ser
>WENV170654995
JTFN01001380
273799
Alphaproteobacteria
CCG
Arg
>WENV170655406
JTFN01029230
273799
Alphaproteobacteria
CCG
Arg
>WENV170655989
JTFN01109121
273799
Alphaproteobacteria
CCG
Arg
>WENV170655771
JTFN01071410
655171
Alphaproteobacteria
GGT
Thr
>WENV170655843
JTFN01082250
655171
Alphaproteobacteria
GGT
Thr
>WENV170655959
JTFN01102662
655171
Alphaproteobacteria
GGT
Thr
>WENV170655579
JTFN01048046
653532
Alphaproteobacteria
GTT
Asn
>WENV170656080
JTFN01126508
275869
Alphaproteobacteria
CAT
Met
>WENV170655466
JTFN01035061
655566
Alphaproteobacteria
GAC
Val
>WENV170655890
JTFN01091582
779636
Alphaproteobacteria
CTG
Gln
>WENV170655245
JTFN01014296
287552
Alphaproteobacteria
GAT
Ile
>WENV170655105
JTFN01005143
659595
Alphaproteobacteria
TTG
Gln
>WENV170655260
JTFN01015529
663664
Alphaproteobacteria
GAC
Val
>WENV170655386
JTFN01027854
273803
Alphaproteobacteria
CCT
Arg
>WENV170655088
JTFN01004773
275157
Alphaproteobacteria
TGG
Pro
>WENV170655236
JTFN01013728
274133
Alphaproteobacteria
ACG
Arg
>WENV170655617
JTFN01052936
274133
Alphaproteobacteria
ACG
Arg
>WENV170655147
JTFN01008022
112802
Alphaproteobacteria
GAG
Leu
>WENV170655589
JTFN01048813
112802
Alphaproteobacteria
GAG
Leu
>WENV170655726
JTFN01063827
275868
Alphaproteobacteria
TCT
Arg
>WENV170655090
JTFN01004835
46034
Alphaproteobacteria
CGA
Ser
>WENV170655527
JTFN01041649
46034
Alphaproteobacteria
CGA
Ser
>WENV170655528
JTFN01041650
46034
Alphaproteobacteria
CGA
Ser
>WENV170656031
JTFN01118442
46034
Alphaproteobacteria
CGA
Ser
>WENV170655122
JTFN01006174
320024
Alphaproteobacteria
CCT
Arg
>WENV170655408
JTFN01029318
320024
Alphaproteobacteria
CCT
Arg
>WENV170655044
JTFN01002599
275989
Alphaproteobacteria
CAT
Met
>WENV170655404
JTFN01029178
275989
Alphaproteobacteria
CAT
Met
>WENV170655405
JTFN01029179
275989
Alphaproteobacteria
CAT
Met
>WENV170655520
JTFN01040983
275989
Alphaproteobacteria
CAT
Met
>WENV170656099
JTFN01133673
275989
Alphaproteobacteria
CAT
Met
>WENV170655223
JTFN01012979
686623
Alphaproteobacteria
TAC
Val
>WENV170655601
JTFN01050455
659578
Alphaproteobacteria
GAC
Val
>WENV170656096
JTFN01132472
659578
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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