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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170676310
LDZR01002236
241240
Euryarchaeota
GAT
Ile
>WENV170676200
LDZR01001638
241233
Euryarchaeota
GAC
Val
>WENV170676407
LDZR01002513
525853
Euryarchaeota
TTG
Gln
>WENV170676192
LDZR01001547
456293
Euryarchaeota
TTG
Gln
>WENV170676189
LDZR01001521
241226
Euryarchaeota
GCG
Arg
>WENV170676032
LDZR01000341
275031
Euryarchaeota
TCT
Arg
>WENV170676038
LDZR01000448
275031
Euryarchaeota
TCT
Arg
>WENV170676191
LDZR01001524
241245
Euryarchaeota
CCC
Gly
>WENV170676029
LDZR01000318
241238
Euryarchaeota
CAT
Met
>WENV170676199
LDZR01001638
241232
Euryarchaeota
GGC
Ala
>WENV170676194
LDZR01001553
241230
Euryarchaeota
TTC
Glu
>WENV170676305
LDZR01002231
241230
Euryarchaeota
TTC
Glu
>WENV170676408
LDZR01002530
241230
Euryarchaeota
TTC
Glu
>WENV170676303
LDZR01002229
485713
Euryarchaeota
CTG
Gln
>WENV170676015
LDZR01000027
485713
Euryarchaeota
CTG
Gln
>WENV170676201
LDZR01001692
241227
Euryarchaeota
CAT
Met
>WENV170676293
LDZR01002225
241227
Euryarchaeota
CAT
Met
>WENV170676322
LDZR01002267
87388
Euryarchaeota
GAG
Leu
>WENV170676308
LDZR01002234
241241
Euryarchaeota
GTA
Tyr
>WENV170676324
LDZR01002293
90806
Euryarchaeota
CAG
Leu
>WENV170676400
LDZR01002406
241569
Euryarchaeota
CTC
Glu
>WENV170676037
LDZR01000423
275028
Euryarchaeota
GAA
Phe
>WENV170676299
LDZR01002226
275028
Euryarchaeota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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