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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170694878
LGVE01015721
271464
Gammaproteobacteria
TGG
Pro
>WENV170696041
LGVE01202228
455342
Gammaproteobacteria
TTC
Glu
>WENV170694919
LGVE01021411
284350
Gammaproteobacteria
TCT
Arg
>WENV170694740
LGVE01005380
270982
Gammaproteobacteria
GAT
Ile
>WENV170695148
LGVE01052908
272023
Gammaproteobacteria
GAT
Ile
>WENV170696057
LGVE01205868
273847
Gammaproteobacteria
CCT
Arg
>WENV170695993
LGVE01194949
273857
Gammaproteobacteria
TGG
Pro
>WENV170696003
LGVE01195740
655197
Gammaproteobacteria
TTG
Gln
>WENV170695470
LGVE01100836
218101
Gammaproteobacteria
GTA
Tyr
>WENV170694985
LGVE01029233
452579
Gammaproteobacteria
TGC
Ala
>WENV170696112
LGVE01223769
180498
Gammaproteobacteria
TAG
Leu
>WENV170695471
LGVE01100836
780101
Gammaproteobacteria
TCC
Gly
>WENV170696090
LGVE01214901
454968
Gammaproteobacteria
TAC
Val
>WENV170696042
LGVE01202228
655385
Gammaproteobacteria
GCC
Gly
>WENV170696091
LGVE01214901
273852
Gammaproteobacteria
GTC
Asp
>WENV170694788
LGVE01008089
457459
Gammaproteobacteria
GGC
Ala
>WENV170695472
LGVE01100836
655194
Gammaproteobacteria
GGT
Thr
>WENV170696019
LGVE01197874
274204
Gammaproteobacteria
GGG
Pro
>WENV170696040
LGVE01202228
454964
Gammaproteobacteria
TTC
Glu
>WENV170696012
LGVE01197028
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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