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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180039179
LLBY010033129
741595
Actinomycetota
CTG
Gln
>WENV180039340
LLBY010053480
513985
Actinomycetota
GGC
Ala
>WENV180039559
LLBY010093203
308395
Actinomycetota
CAT
Met
>WENV180039563
LLBY010094397
55282
Actinomycetota
CGA
Ser
>WENV180039635
LLBY010108947
311787
Actinomycetota
TAA
Leu
>WENV180039640
LLBY010110597
746956
Actinomycetota
TTG
Gln
>WENV180039878
LLBY010200310
83680
Actinomycetota
GAG
Leu
>WENV180039896
LLBY010206332
511551
Actinomycetota
CCC
Gly
>WENV180040291
LLBY010636768
740574
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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