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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170704474
LLEK01000928
456530
Gammaproteobacteria
GCC
Gly
>WENV170704482
LLEK01001180
456530
Gammaproteobacteria
GCC
Gly
>WENV170704496
LLEK01001391
456530
Gammaproteobacteria
GCC
Gly
>WENV170704484
LLEK01001213
463764
Gammaproteobacteria
GTG
His
>WENV170704490
LLEK01001324
463764
Gammaproteobacteria
GTG
His
>WENV170704463
LLEK01000633
283270
Gammaproteobacteria
TCT
Arg
>WENV170704489
LLEK01001324
273055
Gammaproteobacteria
CCG
Arg
>WENV170704460
LLEK01000618
179971
Gammaproteobacteria
GTA
Tyr
>WENV170704505
LLEK01001722
179971
Gammaproteobacteria
GTA
Tyr
>WENV170704510
LLEK01001959
179971
Gammaproteobacteria
GTA
Tyr
>WENV170704471
LLEK01000783
673607
Gammaproteobacteria
TTG
Gln
>WENV170704519
LLEK01002470
451784
Gammaproteobacteria
GAA
Phe
>WENV170704481
LLEK01001147
86896
Gammaproteobacteria
GGA
Ser
>WENV170704503
LLEK01001721
451785
Gammaproteobacteria
GAA
Phe
>WENV170704458
LLEK01000615
451779
Gammaproteobacteria
CAT
Met
>WENV170704531
LLEK01002963
779470
Gammaproteobacteria
GCA
Cys
>WENV170704433
LLEK01000273
30381
Gammaproteobacteria
TGA
Ser
>WENV170704446
LLEK01000469
30381
Gammaproteobacteria
TGA
Ser
>WENV170704447
LLEK01000474
30381
Gammaproteobacteria
TGA
Ser
>WENV170704432
LLEK01000273
270870
Gammaproteobacteria
GGG
Pro
>WENV170704534
LLEK01003320
452899
Gammaproteobacteria
TAC
Val
>WENV170704535
LLEK01003342
452899
Gammaproteobacteria
TAC
Val
>WENV170704495
LLEK01001391
273705
Gammaproteobacteria
CAT
Met
>WENV170704470
LLEK01000783
179969
Gammaproteobacteria
TAG
Leu
>WENV170704472
LLEK01000783
179969
Gammaproteobacteria
TAG
Leu
>WENV170704487
LLEK01001235
270817
Gammaproteobacteria
GAC
Val
>WENV170704515
LLEK01002186
270822
Gammaproteobacteria
CCA
Trp
>WENV170704529
LLEK01002777
270822
Gammaproteobacteria
CCA
Trp
>WENV170704539
LLEK01003353
451837
Gammaproteobacteria
TTC
Glu
>WENV170704480
LLEK01001143
451783
Gammaproteobacteria
GTT
Asn
>WENV170704504
LLEK01001721
451783
Gammaproteobacteria
GTT
Asn
>WENV170704521
LLEK01002470
451783
Gammaproteobacteria
GTT
Asn
>WENV170704523
LLEK01002470
451783
Gammaproteobacteria
GTT
Asn
>WENV170704524
LLEK01002590
270819
Gammaproteobacteria
ACG
Arg
>WENV170704477
LLEK01000987
273704
Gammaproteobacteria
CAT
Met
>WENV170704465
LLEK01000671
270823
Gammaproteobacteria
TGG
Pro
>WENV170704485
LLEK01001213
270823
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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