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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170726462
LSQX01381397
279518
Bacteroidota
TGT
Thr
>WENV170719758
LSQX01126534
30311
Bacteroidota
GGA
Ser
>WENV170726463
LSQX01381397
180132
Bacteroidota
GTA
Tyr
>WENV170718748
LSQX01089600
455588
Bacteroidota
GAA
Phe
>WENV170723234
LSQX01260453
112241
Bacteroidota
CAA
Leu
>WENV170724760
LSQX01317982
660213
Bacteroidota
TTC
Glu
>WENV170720373
LSQX01150974
87190
Bacteroidota
TGA
Ser
>WENV170717714
LSQX01046903
273124
Bacteroidota
GTC
Asp
>WENV170718340
LSQX01071925
273124
Bacteroidota
GTC
Asp
>WENV170721880
LSQX01207497
270514
Bacteroidota
GTT
Asn
>WENV170721881
LSQX01207497
270514
Bacteroidota
GTT
Asn
>WENV170723662
LSQX01277530
270514
Bacteroidota
GTT
Asn
>WENV170723663
LSQX01277530
270514
Bacteroidota
GTT
Asn
>WENV170725118
LSQX01330990
270514
Bacteroidota
GTT
Asn
>WENV170725119
LSQX01330990
270514
Bacteroidota
GTT
Asn
>WENV170725589
LSQX01348550
270514
Bacteroidota
GTT
Asn
>WENV170725590
LSQX01348550
270514
Bacteroidota
GTT
Asn
>WENV170716747
LSQX01010711
273341
Bacteroidota
TGC
Ala
>WENV170717486
LSQX01036830
273341
Bacteroidota
TGC
Ala
>WENV170721615
LSQX01197059
273341
Bacteroidota
TGC
Ala
>WENV170724100
LSQX01293161
273341
Bacteroidota
TGC
Ala
>WENV170726691
LSQX01390186
273341
Bacteroidota
TGC
Ala
>WENV170716476
LSQX01000744
451431
Bacteroidota
CCA
Trp
>WENV170722208
LSQX01221239
451431
Bacteroidota
CCA
Trp
>WENV170725379
LSQX01340849
451431
Bacteroidota
CCA
Trp
>WENV170722009
LSQX01212827
180131
Bacteroidota
TAG
Leu
>WENV170718989
LSQX01097869
279189
Bacteroidota
GTT
Asn
>WENV170726638
LSQX01388355
279189
Bacteroidota
GTT
Asn
>WENV170717231
LSQX01028636
270494
Bacteroidota
CGG
Pro
>WENV170719269
LSQX01108270
270494
Bacteroidota
CGG
Pro
>WENV170721088
LSQX01178956
274353
Bacteroidota
CAT
Met
>WENV170720378
LSQX01151263
241213
Bacteroidota
TGG
Pro
>WENV170721350
LSQX01186998
275945
Bacteroidota
GTT
Asn
>WENV170720293
LSQX01147712
275276
Bacteroidota
GTG
His
>WENV170722728
LSQX01241045
570778
Bacteroidota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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