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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170717799
LSQX01050003
245167
Betaproteobacteria
ACG
Arg
>WENV170717800
LSQX01050003
245167
Betaproteobacteria
ACG
Arg
>WENV170718459
LSQX01076671
245167
Betaproteobacteria
ACG
Arg
>WENV170721570
LSQX01195375
245167
Betaproteobacteria
ACG
Arg
>WENV170722180
LSQX01219880
245167
Betaproteobacteria
ACG
Arg
>WENV170724908
LSQX01323214
245167
Betaproteobacteria
ACG
Arg
>WENV170724949
LSQX01324600
245167
Betaproteobacteria
ACG
Arg
>WENV170726859
LSQX01396425
245167
Betaproteobacteria
ACG
Arg
>WENV170719366
LSQX01112172
793314
Betaproteobacteria
GCA
Cys
>WENV170723298
LSQX01263399
319118
Betaproteobacteria
GAT
Ile
>WENV170726387
LSQX01378261
319118
Betaproteobacteria
GAT
Ile
>WENV170716908
LSQX01016305
458878
Betaproteobacteria
TTC
Glu
>WENV170717197
LSQX01027435
793313
Betaproteobacteria
TCC
Gly
>WENV170719304
LSQX01109696
319120
Betaproteobacteria
CAT
Met
>WENV170721569
LSQX01195375
319120
Betaproteobacteria
CAT
Met
>WENV170726858
LSQX01396425
319120
Betaproteobacteria
CAT
Met
>WENV170721862
LSQX01206574
319123
Betaproteobacteria
TGG
Pro
>WENV170726148
LSQX01369038
319123
Betaproteobacteria
TGG
Pro
>WENV170725780
LSQX01356203
671439
Betaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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