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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170730509
LULH01000101
30553
Alphaproteobacteria
GGA
Ser
>WENV170730514
LULH01000123
277664
Alphaproteobacteria
GTC
Asp
>WENV170730459
LULH01000003
274224
Alphaproteobacteria
CAT
Met
>WENV170730568
LULH01000352
655363
Alphaproteobacteria
GGT
Thr
>WENV170730496
LULH01000088
455172
Alphaproteobacteria
GGC
Ala
>WENV170731292
LULH01054335
655300
Alphaproteobacteria
GTT
Asn
>WENV170730504
LULH01000096
454512
Alphaproteobacteria
CCA
Trp
>WENV170730546
LULH01000265
455360
Alphaproteobacteria
CGC
Ala
>WENV170730520
LULH01000142
655361
Alphaproteobacteria
GCC
Gly
>WENV170730551
LULH01000293
454504
Alphaproteobacteria
CAT
Met
>WENV170730462
LULH01000010
281027
Alphaproteobacteria
CCT
Arg
>WENV170730521
LULH01000147
112839
Alphaproteobacteria
CAG
Leu
>WENV170730485
LULH01000059
780039
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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