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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170730735
LULH01002633
455176
Cyanobacteriota
GTG
His
>WENV170730767
LULH01003612
458794
Cyanobacteriota
CAT
Met
>WENV170730880
LULH01008256
46559
Cyanobacteriota
GGA
Ser
>WENV170730990
LULH01015550
46559
Cyanobacteriota
GGA
Ser
>WENV170730734
LULH01002556
181217
Cyanobacteriota
CAA
Leu
>WENV170730759
LULH01003472
73049
Cyanobacteriota
TAA
Leu
>WENV170730831
LULH01006066
277353
Cyanobacteriota
ACG
Arg
>WENV170730727
LULH01002386
657291
Cyanobacteriota
GGT
Thr
>WENV170730850
LULH01006841
181165
Cyanobacteriota
TAG
Leu
>WENV170731028
LULH01018831
654134
Cyanobacteriota
GTT
Asn
>WENV170730703
LULH01001966
779735
Cyanobacteriota
TCC
Gly
>WENV170731164
LULH01033350
277354
Cyanobacteriota
GGG
Pro
>WENV170730955
LULH01012991
20153
Cyanobacteriota
GCT
Ser
>WENV170730645
LULH01000916
454022
Cyanobacteriota
TGC
Ala
>WENV170730863
LULH01007537
272148
Cyanobacteriota
CAT
Met
>WENV170730611
LULH01000571
657285
Cyanobacteriota
TTG
Gln
>WENV170730726
LULH01002386
181218
Cyanobacteriota
GTA
Tyr
>WENV170730650
LULH01001009
46524
Cyanobacteriota
TGA
Ser
>WENV170730710
LULH01002066
271967
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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