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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170758233
LUMR01000154
655310
Cyanobacteriota
GTT
Asn
>WENV170758170
LUMR01000017
455176
Cyanobacteriota
GTG
His
>WENV170758367
LUMR01001218
455176
Cyanobacteriota
GTG
His
>WENV170758183
LUMR01000036
19914
Cyanobacteriota
GCT
Ser
>WENV170758607
LUMR01009581
458794
Cyanobacteriota
CAT
Met
>WENV170758451
LUMR01002886
46559
Cyanobacteriota
GGA
Ser
>WENV170758278
LUMR01000314
274043
Cyanobacteriota
CCG
Arg
>WENV170758343
LUMR01000896
181217
Cyanobacteriota
CAA
Leu
>WENV170758201
LUMR01000073
73049
Cyanobacteriota
TAA
Leu
>WENV170758168
LUMR01000017
112853
Cyanobacteriota
CAG
Leu
>WENV170758340
LUMR01000882
277353
Cyanobacteriota
ACG
Arg
>WENV170758300
LUMR01000431
657291
Cyanobacteriota
GGT
Thr
>WENV170758505
LUMR01004754
657291
Cyanobacteriota
GGT
Thr
>WENV170758739
LUMR01021395
657291
Cyanobacteriota
GGT
Thr
>WENV170758171
LUMR01000019
274052
Cyanobacteriota
CAT
Met
>WENV170758241
LUMR01000187
181165
Cyanobacteriota
TAG
Leu
>WENV170758448
LUMR01002780
459193
Cyanobacteriota
CGT
Thr
>WENV170758236
LUMR01000160
46064
Cyanobacteriota
TGA
Ser
>WENV170758157
LUMR01000005
274048
Cyanobacteriota
TGG
Pro
>WENV170758368
LUMR01001232
654134
Cyanobacteriota
GTT
Asn
>WENV170758178
LUMR01000027
274045
Cyanobacteriota
GTC
Asp
>WENV170758309
LUMR01000513
779735
Cyanobacteriota
TCC
Gly
>WENV170758562
LUMR01006605
270846
Cyanobacteriota
CAT
Met
>WENV170758169
LUMR01000017
154050
Cyanobacteriota
CAA
Leu
>WENV170758613
LUMR01009659
277354
Cyanobacteriota
GGG
Pro
>WENV170758534
LUMR01005767
20153
Cyanobacteriota
GCT
Ser
>WENV170758572
LUMR01007168
20153
Cyanobacteriota
GCT
Ser
>WENV170758206
LUMR01000080
454022
Cyanobacteriota
TGC
Ala
>WENV170758361
LUMR01001184
272148
Cyanobacteriota
CAT
Met
>WENV170758177
LUMR01000027
455175
Cyanobacteriota
CCA
Trp
>WENV170758270
LUMR01000287
657285
Cyanobacteriota
TTG
Gln
>WENV170758299
LUMR01000431
181218
Cyanobacteriota
GTA
Tyr
>WENV170758189
LUMR01000050
655305
Cyanobacteriota
GAC
Val
>WENV170758203
LUMR01000080
655307
Cyanobacteriota
TGT
Thr
>WENV170758461
LUMR01003223
46524
Cyanobacteriota
TGA
Ser
>WENV170758197
LUMR01000068
455178
Cyanobacteriota
CGC
Ala
>WENV170758296
LUMR01000412
271967
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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