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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170784530
MCNE01000072
271411
Gammaproteobacteria
GGG
Pro
>WENV170784567
MCNE01000864
456952
Gammaproteobacteria
CGC
Ala
>WENV170784518
MCNE01000019
112358
Gammaproteobacteria
TAA
Leu
>WENV170784531
MCNE01000088
45746
Gammaproteobacteria
CGA
Ser
>WENV170784520
MCNE01000028
455431
Gammaproteobacteria
TAC
Val
>WENV170784545
MCNE01000228
87261
Gammaproteobacteria
TGA
Ser
>WENV170784581
MCNE01001718
456552
Gammaproteobacteria
TGT
Thr
>WENV170784535
MCNE01000133
452337
Gammaproteobacteria
GTT
Asn
>WENV170784591
MCNE01002975
47108
Gammaproteobacteria
TGA
Ser
>WENV170784526
MCNE01000047
180068
Gammaproteobacteria
TAG
Leu
>WENV170784595
MCNE01003583
458856
Gammaproteobacteria
GAA
Phe
>WENV170784592
MCNE01003081
779437
Gammaproteobacteria
CCC
Gly
>WENV170784512
MCNE01000006
779594
Gammaproteobacteria
CCC
Gly
>WENV170784593
MCNE01003321
12570
Gammaproteobacteria
GCT
Ser
>WENV170784525
MCNE01000047
452332
Gammaproteobacteria
GTG
His
>WENV170784513
MCNE01000008
30385
Gammaproteobacteria
GCT
Ser
>WENV170784585
MCNE01002583
270682
Gammaproteobacteria
TTG
Gln
>WENV170784521
MCNE01000031
274252
Gammaproteobacteria
CAT
Met
>WENV170784511
MCNE01000003
271409
Gammaproteobacteria
CCG
Arg
>WENV170784509
MCNE01000001
180588
Gammaproteobacteria
CAA
Leu
>WENV170784532
MCNE01000111
273025
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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