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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170897226
MDTD01107937
218595
Alphaproteobacteria
CAA
Leu
>WENV170890601
MDTD01012840
457159
Alphaproteobacteria
CGC
Ala
>WENV170891652
MDTD01027161
275828
Alphaproteobacteria
GTC
Asp
>WENV170899867
MDTD01146192
275828
Alphaproteobacteria
GTC
Asp
>WENV170890325
MDTD01008027
655365
Alphaproteobacteria
TTC
Glu
>WENV170899948
MDTD01147271
180489
Alphaproteobacteria
TAG
Leu
>WENV170896594
MDTD01098090
655167
Alphaproteobacteria
TTC
Glu
>WENV170892572
MDTD01039745
655421
Alphaproteobacteria
GGT
Thr
>WENV170902326
MDTD01183321
655421
Alphaproteobacteria
GGT
Thr
>WENV170901710
MDTD01174853
273805
Alphaproteobacteria
ACG
Arg
>WENV170897534
MDTD01113012
273805
Alphaproteobacteria
ACG
Arg
>WENV170898293
MDTD01123627
273805
Alphaproteobacteria
ACG
Arg
>WENV170900942
MDTD01162121
273805
Alphaproteobacteria
ACG
Arg
>WENV170893996
MDTD01059335
273452
Alphaproteobacteria
CAT
Met
>WENV170897335
MDTD01109992
780331
Alphaproteobacteria
TCC
Gly
>WENV170895309
MDTD01077550
780331
Alphaproteobacteria
TCC
Gly
>WENV170891799
MDTD01029210
780260
Alphaproteobacteria
GCA
Cys
>WENV170898401
MDTD01125387
454510
Alphaproteobacteria
CGT
Thr
>WENV170893104
MDTD01047733
655623
Alphaproteobacteria
GCC
Gly
>WENV170902406
MDTD01184821
463568
Alphaproteobacteria
CCA
Trp
>WENV170896593
MDTD01098090
273799
Alphaproteobacteria
CCG
Arg
>WENV170890604
MDTD01012840
218220
Alphaproteobacteria
>WENV170895967
MDTD01087934
218220
Alphaproteobacteria
>WENV170894613
MDTD01068217
454322
Alphaproteobacteria
TAC
Val
>WENV170900567
MDTD01156203
454322
Alphaproteobacteria
TAC
Val
>WENV170900400
MDTD01153956
321511
Alphaproteobacteria
CAT
Met
>WENV170894398
MDTD01064890
274224
Alphaproteobacteria
CAT
Met
>WENV170892750
MDTD01042393
456496
Alphaproteobacteria
GAA
Phe
>WENV170897896
MDTD01118454
456496
Alphaproteobacteria
GAA
Phe
>WENV170890573
MDTD01012084
653532
Alphaproteobacteria
GTT
Asn
>WENV170891019
MDTD01018026
653532
Alphaproteobacteria
GTT
Asn
>WENV170891042
MDTD01018331
653532
Alphaproteobacteria
GTT
Asn
>WENV170891440
MDTD01023980
653532
Alphaproteobacteria
GTT
Asn
>WENV170901171
MDTD01165965
653532
Alphaproteobacteria
GTT
Asn
>WENV170901251
MDTD01167403
653532
Alphaproteobacteria
GTT
Asn
>WENV170893071
MDTD01047163
654987
Alphaproteobacteria
GAC
Val
>WENV170897809
MDTD01117491
19999
Alphaproteobacteria
GCT
Ser
>WENV170901657
MDTD01174025
19999
Alphaproteobacteria
GCT
Ser
>WENV170900712
MDTD01158301
456498
Alphaproteobacteria
CAT
Met
>WENV170894568
MDTD01067520
275869
Alphaproteobacteria
CAT
Met
>WENV170890036
MDTD01003980
655363
Alphaproteobacteria
GGT
Thr
>WENV170902679
MDTD01189594
655363
Alphaproteobacteria
GGT
Thr
>WENV170902130
MDTD01180420
274144
Alphaproteobacteria
GTG
His
>WENV170899811
MDTD01145094
273450
Alphaproteobacteria
TCT
Arg
>WENV170902551
MDTD01187174
273450
Alphaproteobacteria
TCT
Arg
>WENV170893231
MDTD01049705
655566
Alphaproteobacteria
GAC
Val
>WENV170903227
MDTD01198459
294326
Alphaproteobacteria
CCG
Arg
>WENV170893784
MDTD01056385
273801
Alphaproteobacteria
GTG
His
>WENV170891619
MDTD01026594
779636
Alphaproteobacteria
CTG
Gln
>WENV170898299
MDTD01123733
779636
Alphaproteobacteria
CTG
Gln
>WENV170896891
MDTD01102650
655392
Alphaproteobacteria
GAC
Val
>WENV170903438
MDTD01201890
274138
Alphaproteobacteria
CAT
Met
>WENV170903101
MDTD01196526
463649
Alphaproteobacteria
GAA
Phe
>WENV170893136
MDTD01048349
113188
Alphaproteobacteria
GAG
Leu
>WENV170898564
MDTD01127887
113188
Alphaproteobacteria
GAG
Leu
>WENV170893873
MDTD01057578
270799
Alphaproteobacteria
CAT
Met
>WENV170890390
MDTD01009008
454512
Alphaproteobacteria
CCA
Trp
>WENV170902568
MDTD01187414
454056
Alphaproteobacteria
CGT
Thr
>WENV170897397
MDTD01111044
275157
Alphaproteobacteria
TGG
Pro
>WENV170890411
MDTD01009432
270796
Alphaproteobacteria
GTC
Asp
>WENV170903477
MDTD01202724
270796
Alphaproteobacteria
GTC
Asp
>WENV170903478
MDTD01202724
270796
Alphaproteobacteria
GTC
Asp
>WENV170893117
MDTD01048001
655361
Alphaproteobacteria
GCC
Gly
>WENV170893212
MDTD01049402
655361
Alphaproteobacteria
GCC
Gly
>WENV170892910
MDTD01044820
271361
Alphaproteobacteria
CAT
Met
>WENV170890512
MDTD01011041
274141
Alphaproteobacteria
CCT
Arg
>WENV170890264
MDTD01007383
273603
Alphaproteobacteria
TGG
Pro
>WENV170897972
MDTD01119273
454166
Alphaproteobacteria
CGC
Ala
>WENV170892417
MDTD01038031
655271
Alphaproteobacteria
GGT
Thr
>WENV170897966
MDTD01119145
655822
Alphaproteobacteria
GAC
Val
>WENV170892567
MDTD01039674
455171
Alphaproteobacteria
CGT
Thr
>WENV170901582
MDTD01172558
671670
Alphaproteobacteria
CAC
Val
>WENV170893103
MDTD01047733
654685
Alphaproteobacteria
GGT
Thr
>WENV170890184
MDTD01006077
780582
Alphaproteobacteria
TCC
Gly
>WENV170890570
MDTD01012033
780582
Alphaproteobacteria
TCC
Gly
>WENV170896031
MDTD01089053
780582
Alphaproteobacteria
TCC
Gly
>WENV170896173
MDTD01091233
780582
Alphaproteobacteria
TCC
Gly
>WENV170897010
MDTD01104573
780582
Alphaproteobacteria
TCC
Gly
>WENV170900892
MDTD01161217
31090
Alphaproteobacteria
GGA
Ser
>WENV170895501
MDTD01080285
654103
Alphaproteobacteria
GAA
Phe
>WENV170895555
MDTD01081350
780039
Alphaproteobacteria
GCA
Cys
>WENV170901706
MDTD01174729
779596
Alphaproteobacteria
TCC
Gly
>WENV170892842
MDTD01043399
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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