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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170960768
MKWU01051096
456952
Gammaproteobacteria
CGC
Ala
>WENV170957771
MKWU01000168
271464
Gammaproteobacteria
TGG
Pro
>WENV170960719
MKWU01046166
284350
Gammaproteobacteria
TCT
Arg
>WENV170960099
MKWU01016042
272023
Gammaproteobacteria
GAT
Ile
>WENV170960130
MKWU01016779
272023
Gammaproteobacteria
GAT
Ile
>WENV170960345
MKWU01024954
300085
Gammaproteobacteria
ACG
Arg
>WENV170957647
MKWU01000102
463383
Gammaproteobacteria
CCA
Trp
>WENV170960611
MKWU01039387
463383
Gammaproteobacteria
CCA
Trp
>WENV170960992
MKWU01072581
457171
Gammaproteobacteria
GTT
Asn
>WENV170958232
MKWU01000664
451982
Gammaproteobacteria
GGC
Ala
>WENV170959428
MKWU01005031
451982
Gammaproteobacteria
GGC
Ala
>WENV170960431
MKWU01028927
451982
Gammaproteobacteria
GGC
Ala
>WENV170961218
MKWU01098985
451982
Gammaproteobacteria
GGC
Ala
>WENV170961125
MKWU01084577
458856
Gammaproteobacteria
GAA
Phe
>WENV170961126
MKWU01084577
458856
Gammaproteobacteria
GAA
Phe
>WENV170961287
MKWU01108858
779437
Gammaproteobacteria
CCC
Gly
>WENV170960961
MKWU01068945
780704
Gammaproteobacteria
GCA
Cys
>WENV170958570
MKWU01001367
780765
Gammaproteobacteria
CCC
Gly
>WENV170959297
MKWU01004037
452579
Gammaproteobacteria
TGC
Ala
>WENV170958121
MKWU01000542
274865
Gammaproteobacteria
ACG
Arg
>WENV170958218
MKWU01000639
276372
Gammaproteobacteria
ACG
Arg
>WENV170959074
MKWU01002933
276372
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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