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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180051962
MPLU02257860
451922
Gammaproteobacteria
TGT
Thr
>WENV180049929
MPLU02097542
454866
Gammaproteobacteria
TAC
Val
>WENV180050315
MPLU02127155
454866
Gammaproteobacteria
TAC
Val
>WENV180050316
MPLU02127155
454866
Gammaproteobacteria
TAC
Val
>WENV180051614
MPLU02230957
454867
Gammaproteobacteria
GTG
His
>WENV180052579
MPLU02309790
180480
Gammaproteobacteria
GTA
Tyr
>WENV180052505
MPLU02304667
453181
Gammaproteobacteria
GTG
His
>WENV180048761
MPLU02007035
270982
Gammaproteobacteria
GAT
Ile
>WENV180049739
MPLU02082096
270982
Gammaproteobacteria
GAT
Ile
>WENV180051866
MPLU02249531
270982
Gammaproteobacteria
GAT
Ile
>WENV180053140
MPLU02349081
270982
Gammaproteobacteria
GAT
Ile
>WENV180049895
MPLU02094375
272023
Gammaproteobacteria
GAT
Ile
>WENV180051859
MPLU02249278
782287
Gammaproteobacteria
GCA
Cys
>WENV180052581
MPLU02309790
455405
Gammaproteobacteria
GGT
Thr
>WENV180052773
MPLU02323563
274864
Gammaproteobacteria
ACG
Arg
>WENV180052774
MPLU02323563
274864
Gammaproteobacteria
ACG
Arg
>WENV180052739
MPLU02322222
276976
Gammaproteobacteria
TCT
Arg
>WENV180050589
MPLU02152506
275002
Gammaproteobacteria
ACG
Arg
>WENV180050590
MPLU02152506
275002
Gammaproteobacteria
ACG
Arg
>WENV180049093
MPLU02033695
655147
Gammaproteobacteria
TTG
Gln
>WENV180051615
MPLU02230957
273756
Gammaproteobacteria
TGG
Pro
>WENV180048836
MPLU02015667
273749
Gammaproteobacteria
CCA
Trp
>WENV180049303
MPLU02049920
454858
Gammaproteobacteria
TTT
Lys
>WENV180051178
MPLU02196201
272104
Gammaproteobacteria
CGG
Pro
>WENV180053016
MPLU02339773
780765
Gammaproteobacteria
CCC
Gly
>WENV180050757
MPLU02166219
458352
Gammaproteobacteria
TTG
Gln
>WENV180051212
MPLU02198220
474503
Gammaproteobacteria
GTT
Asn
>WENV180049386
MPLU02056448
479074
Gammaproteobacteria
GCC
Gly
>WENV180049387
MPLU02056448
479074
Gammaproteobacteria
GCC
Gly
>WENV180051858
MPLU02249278
479074
Gammaproteobacteria
GCC
Gly
>WENV180052203
MPLU02276302
479074
Gammaproteobacteria
GCC
Gly
>WENV180050081
MPLU02108836
781121
Gammaproteobacteria
GCA
Cys
>WENV180052204
MPLU02276302
780557
Gammaproteobacteria
GCA
Cys
>WENV180050385
MPLU02134178
273754
Gammaproteobacteria
GTT
Asn
>WENV180050386
MPLU02134178
273754
Gammaproteobacteria
GTT
Asn
>WENV180051353
MPLU02207420
273754
Gammaproteobacteria
GTT
Asn
>WENV180052552
MPLU02307416
273754
Gammaproteobacteria
GTT
Asn
>WENV180052553
MPLU02307416
273754
Gammaproteobacteria
GTT
Asn
>WENV180051395
MPLU02211063
283256
Gammaproteobacteria
GAT
Ile
>WENV180052446
MPLU02299395
276972
Gammaproteobacteria
CCA
Trp
>WENV180052506
MPLU02304667
181084
Gammaproteobacteria
TAG
Leu
>WENV180052205
MPLU02276302
112817
Gammaproteobacteria
TAA
Leu
>WENV180052507
MPLU02304667
276975
Gammaproteobacteria
TGG
Pro
>WENV180052738
MPLU02322222
276975
Gammaproteobacteria
TGG
Pro
>WENV180052504
MPLU02304667
276975
Gammaproteobacteria
TGG
Pro
>WENV180052821
MPLU02327908
474506
Gammaproteobacteria
GCC
Gly
>WENV180052577
MPLU02309790
456267
Gammaproteobacteria
GAA
Phe
>WENV180052500
MPLU02304101
466186
Gammaproteobacteria
TGC
Ala
>WENV180050949
MPLU02182328
452407
Gammaproteobacteria
GAA
Phe
>WENV180049927
MPLU02097542
454091
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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