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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180103147
OAPA01003673
653534
Alphaproteobacteria
GCC
Gly
>WENV180103148
OAPA01003673
653534
Alphaproteobacteria
GCC
Gly
>WENV180103149
OAPA01003673
653534
Alphaproteobacteria
GCC
Gly
>WENV180103150
OAPA01003673
653534
Alphaproteobacteria
GCC
Gly
>WENV180103381
OAPA01024256
45799
Alphaproteobacteria
GCT
Ser
>WENV180103341
OAPA01017916
218187
Alphaproteobacteria
GTA
Tyr
>WENV180103453
OAPA01041304
275671
Alphaproteobacteria
ACG
Arg
>WENV180103372
OAPA01022731
49736
Alphaproteobacteria
TGA
Ser
>WENV180103525
OAPA01062574
454054
Alphaproteobacteria
TGC
Ala
>WENV180103085
OAPA01001525
456891
Alphaproteobacteria
CGT
Thr
>WENV180103511
OAPA01058550
274131
Alphaproteobacteria
CAT
Met
>WENV180103579
OAPA01076157
455506
Alphaproteobacteria
CAT
Met
>WENV180103287
OAPA01013691
270799
Alphaproteobacteria
CAT
Met
>WENV180103437
OAPA01038665
112838
Alphaproteobacteria
GAG
Leu
>WENV180103405
OAPA01030734
655361
Alphaproteobacteria
GCC
Gly
>WENV180103476
OAPA01045761
655822
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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