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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180126362
OASZ01003649
468335
Verrucomicrobiota
CCA
Trp
>WENV180126330
OASZ01002866
469002
Verrucomicrobiota
CGC
Ala
>WENV180126297
OASZ01002064
468342
Verrucomicrobiota
>WENV180126331
OASZ01002877
228818
Verrucomicrobiota
CAA
Leu
>WENV180126290
OASZ01001992
662558
Verrucomicrobiota
GCC
Gly
>WENV180126291
OASZ01002013
663148
Verrucomicrobiota
CCT
Arg
>WENV180126410
OASZ01004836
663191
Verrucomicrobiota
TTG
Gln
>WENV180126261
OASZ01001709
115335
Verrucomicrobiota
CAG
Leu
>WENV180126219
OASZ01001249
183416
Verrucomicrobiota
TAG
Leu
>WENV180126229
OASZ01001326
662760
Verrucomicrobiota
CAC
Val
>WENV180126227
OASZ01001312
469040
Verrucomicrobiota
CAT
Met
>WENV180126363
OASZ01003718
12844
Verrucomicrobiota
GCT
Ser
>WENV180126312
OASZ01002457
286765
Verrucomicrobiota
GGG
Pro
>WENV180126197
OASZ01000970
88820
Verrucomicrobiota
TGA
Ser
>WENV180126394
OASZ01004333
468989
Verrucomicrobiota
CTT
Lys
>WENV180126395
OASZ01004333
468989
Verrucomicrobiota
CTT
Lys
>WENV180126276
OASZ01001930
242669
Verrucomicrobiota
GTC
Asp
>WENV180126337
OASZ01002911
663166
Verrucomicrobiota
TGT
Thr
>WENV180126464
OASZ01008395
663168
Verrucomicrobiota
GTT
Asn
>WENV180126393
OASZ01004333
662761
Verrucomicrobiota
CGT
Thr
>WENV180126226
OASZ01001312
662758
Verrucomicrobiota
GTG
His
>WENV180126257
OASZ01001554
286784
Verrucomicrobiota
ACG
Arg
>WENV180126489
OASZ01011709
663178
Verrucomicrobiota
GAC
Val
>WENV180126350
OASZ01003337
12872
Verrucomicrobiota
CGA
Ser
>WENV180126326
OASZ01002710
469030
Verrucomicrobiota
TTT
Lys
>WENV180126414
OASZ01004977
286752
Verrucomicrobiota
TCT
Arg
>WENV180126340
OASZ01002983
285841
Verrucomicrobiota
TGG
Pro
>WENV180126339
OASZ01002983
469466
Verrucomicrobiota
GAA
Phe
>WENV180126228
OASZ01001315
286773
Verrucomicrobiota
CGG
Pro
>WENV180126241
OASZ01001396
155675
Verrucomicrobiota
TAA
Leu
>WENV180126359
OASZ01003553
663161
Verrucomicrobiota
TAC
Val
>WENV180126379
OASZ01004093
286760
Verrucomicrobiota
CAT
Met
>WENV180126317
OASZ01002520
662765
Verrucomicrobiota
GCA
Cys
>WENV180126435
OASZ01006723
662614
Verrucomicrobiota
GGT
Thr
>WENV180126421
OASZ01005387
663157
Verrucomicrobiota
CAT
Met
>WENV180126221
OASZ01001262
783783
Verrucomicrobiota
CCC
Gly
>WENV180126361
OASZ01003632
663193
Verrucomicrobiota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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