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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180134713
OATK01001022
468335
Verrucomicrobiota
CCA
Trp
>WENV180134770
OATK01001436
469002
Verrucomicrobiota
CGC
Ala
>WENV180134579
OATK01000538
468342
Verrucomicrobiota
>WENV180134685
OATK01000920
228818
Verrucomicrobiota
CAA
Leu
>WENV180134737
OATK01001195
662558
Verrucomicrobiota
GCC
Gly
>WENV180134747
OATK01001248
662558
Verrucomicrobiota
GCC
Gly
>WENV180134870
OATK01002357
784158
Verrucomicrobiota
TCC
Gly
>WENV180134724
OATK01001092
663148
Verrucomicrobiota
CCT
Arg
>WENV180134833
OATK01002092
663191
Verrucomicrobiota
TTG
Gln
>WENV180134509
OATK01000363
115335
Verrucomicrobiota
CAG
Leu
>WENV180134334
OATK01000081
155851
Verrucomicrobiota
GTA
Tyr
>WENV180134592
OATK01000561
662766
Verrucomicrobiota
CTG
Gln
>WENV180134651
OATK01000769
183416
Verrucomicrobiota
TAG
Leu
>WENV180134550
OATK01000481
662760
Verrucomicrobiota
CAC
Val
>WENV180134580
OATK01000538
12844
Verrucomicrobiota
GCT
Ser
>WENV180135219
OATK01010670
31527
Verrucomicrobiota
GGA
Ser
>WENV180134392
OATK01000135
286765
Verrucomicrobiota
GGG
Pro
>WENV180134757
OATK01001354
470563
Verrucomicrobiota
GGC
Ala
>WENV180134818
OATK01001851
88820
Verrucomicrobiota
TGA
Ser
>WENV180134534
OATK01000452
468989
Verrucomicrobiota
CTT
Lys
>WENV180134535
OATK01000452
468989
Verrucomicrobiota
CTT
Lys
>WENV180134591
OATK01000561
242669
Verrucomicrobiota
GTC
Asp
>WENV180134810
OATK01001777
663166
Verrucomicrobiota
TGT
Thr
>WENV180134333
OATK01000081
663168
Verrucomicrobiota
GTT
Asn
>WENV180134533
OATK01000452
662761
Verrucomicrobiota
CGT
Thr
>WENV180134483
OATK01000315
155855
Verrucomicrobiota
AAG
Leu
>WENV180134768
OATK01001431
662758
Verrucomicrobiota
GTG
His
>WENV180134577
OATK01000538
286784
Verrucomicrobiota
ACG
Arg
>WENV180134692
OATK01000949
663178
Verrucomicrobiota
GAC
Val
>WENV180134558
OATK01000496
12872
Verrucomicrobiota
CGA
Ser
>WENV180134767
OATK01001431
470561
Verrucomicrobiota
TTC
Glu
>WENV180134862
OATK01002286
470561
Verrucomicrobiota
TTC
Glu
>WENV180134863
OATK01002286
470561
Verrucomicrobiota
TTC
Glu
>WENV180134709
OATK01001016
469030
Verrucomicrobiota
TTT
Lys
>WENV180134769
OATK01001431
470562
Verrucomicrobiota
CAT
Met
>WENV180134654
OATK01000778
286752
Verrucomicrobiota
TCT
Arg
>WENV180134391
OATK01000135
285841
Verrucomicrobiota
TGG
Pro
>WENV180134390
OATK01000135
469466
Verrucomicrobiota
GAA
Phe
>WENV180134532
OATK01000452
286773
Verrucomicrobiota
CGG
Pro
>WENV180134578
OATK01000538
155675
Verrucomicrobiota
TAA
Leu
>WENV180134693
OATK01000949
663161
Verrucomicrobiota
TAC
Val
>WENV180134640
OATK01000740
286760
Verrucomicrobiota
CAT
Met
>WENV180134484
OATK01000315
662765
Verrucomicrobiota
GCA
Cys
>WENV180134712
OATK01001022
662614
Verrucomicrobiota
GGT
Thr
>WENV180135070
OATK01005008
663157
Verrucomicrobiota
CAT
Met
>WENV180134869
OATK01002357
783783
Verrucomicrobiota
CCC
Gly
>WENV180134696
OATK01000959
663193
Verrucomicrobiota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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