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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180136481
OATN01000020
270850
Bacteroidota
GGC
Ala
>WENV180136460
OATN01000010
779477
Bacteroidota
TTG
Gln
>WENV180136774
OATN01002374
113533
Bacteroidota
CAG
Leu
>WENV180136818
OATN01007187
779388
Bacteroidota
CTG
Gln
>WENV180136477
OATN01000018
30311
Bacteroidota
GGA
Ser
>WENV180136427
OATN01000003
779381
Bacteroidota
CTG
Gln
>WENV180136826
OATN01009174
112241
Bacteroidota
CAA
Leu
>WENV180136830
OATN01010408
458644
Bacteroidota
CCC
Gly
>WENV180136463
OATN01000012
153684
Bacteroidota
GTA
Tyr
>WENV180136794
OATN01003532
180313
Bacteroidota
TAG
Leu
>WENV180136453
OATN01000008
86859
Bacteroidota
TGA
Ser
>WENV180136454
OATN01000008
86859
Bacteroidota
TGA
Ser
>WENV180136438
OATN01000005
112296
Bacteroidota
GAG
Leu
>WENV180136428
OATN01000003
240600
Bacteroidota
GGG
Pro
>WENV180136839
OATN01014103
779393
Bacteroidota
TTG
Gln
>WENV180136870
OATN01030579
270494
Bacteroidota
CGG
Pro
>WENV180136552
OATN01000079
451484
Bacteroidota
CAT
Met
>WENV180136780
OATN01002588
30567
Bacteroidota
GGA
Ser
>WENV180136828
OATN01009791
653388
Bacteroidota
TTC
Glu
>WENV180136513
OATN01000042
270530
Bacteroidota
CAT
Met
>WENV180136539
OATN01000068
240627
Bacteroidota
TGG
Pro
>WENV180136850
OATN01016120
653774
Bacteroidota
CAT
Met
>WENV180136834
OATN01012228
153692
Bacteroidota
GTA
Tyr
>WENV180136424
OATN01000001
270851
Bacteroidota
TCT
Arg
>WENV180136835
OATN01012239
270851
Bacteroidota
TCT
Arg
>WENV180136506
OATN01000036
451808
Bacteroidota
CGT
Thr
>WENV180136478
OATN01000019
653565
Bacteroidota
CCT
Arg
>WENV180136462
OATN01000011
653377
Bacteroidota
CTC
Glu
>WENV180136692
OATN01000377
653350
Bacteroidota
GCA
Cys
>WENV180136476
OATN01000017
179978
Bacteroidota
TAG
Leu
>WENV180136833
OATN01011891
270497
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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