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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1000160
SRR001036.166887
180542
Alphaproteobacteria
TAG
Leu
>SRA1000142
SRR001036.54980
154277
Alphaproteobacteria
GTA
Tyr
>SRA1000157
SRR001036.155457
154277
Alphaproteobacteria
GTA
Tyr
>SRA1000158
SRR001036.161401
154277
Alphaproteobacteria
GTA
Tyr
>SRA1000178
SRR001036.279971
654791
Alphaproteobacteria
CTC
Glu
>SRA1000185
SRR001036.295160
452755
Alphaproteobacteria
TAC
Val
>SRA1000204
SRR001036.353905
452755
Alphaproteobacteria
TAC
Val
>SRA1000166
SRR001036.218364
275921
Alphaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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