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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1005926
SRR014589.53829
19901
Bacillota
GCT
Ser
>SRA1005961
SRR014589.75143
19901
Bacillota
GCT
Ser
>SRA1005970
SRR014589.82196
19901
Bacillota
GCT
Ser
>SRA1005981
SRR014589.88914
19901
Bacillota
GCT
Ser
>SRA1005990
SRR014589.91859
19901
Bacillota
GCT
Ser
>SRA1006068
SRR014589.159752
19901
Bacillota
GCT
Ser
>SRA1006075
SRR014589.168928
19901
Bacillota
GCT
Ser
>SRA1006100
SRR014589.188561
19901
Bacillota
GCT
Ser
>SRA1006105
SRR014589.195394
19901
Bacillota
GCT
Ser
>SRA1005875
SRR014589.4759
452920
Bacillota
TGT
Thr
>SRA1005921
SRR014589.46528
452920
Bacillota
TGT
Thr
>SRA1005923
SRR014589.49598
452920
Bacillota
TGT
Thr
>SRA1005932
SRR014589.58943
452920
Bacillota
TGT
Thr
>SRA1006019
SRR014589.116901
452920
Bacillota
TGT
Thr
>SRA1006039
SRR014589.137569
452920
Bacillota
TGT
Thr
>SRA1006041
SRR014589.138116
452920
Bacillota
TGT
Thr
>SRA1006046
SRR014589.145081
452920
Bacillota
TGT
Thr
>SRA1006090
SRR014589.177647
452920
Bacillota
TGT
Thr
>SRA1006123
SRR014589.222739
452920
Bacillota
TGT
Thr
>SRA1006128
SRR014589.234492
452920
Bacillota
TGT
Thr
>SRA1005962
SRR014589.75143
654656
Bacillota
TTC
Glu
>SRA1005982
SRR014589.88914
654656
Bacillota
TTC
Glu
>SRA1006096
SRR014589.182197
654656
Bacillota
TTC
Glu
>SRA1006101
SRR014589.188561
654656
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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