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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV079384
AATC01000024
147487
Bacillota
ACG
Arg
>WENV079422
AATC01004403
147487
Bacillota
ACG
Arg
>WENV079398
AATC01000650
235137
Bacillota
TGC
Ala
>WENV079416
AATC01003377
235137
Bacillota
TGC
Ala
>WENV079378
AATC01000024
237265
Bacillota
TAC
Val
>WENV079428
AATC01004403
237265
Bacillota
TAC
Val
>WENV079452
AATC01005664
237265
Bacillota
TAC
Val
>WENV079392
AATC01000170
238211
Bacillota
TGT
Thr
>WENV079443
AATC01005109
238211
Bacillota
TGT
Thr
>WENV079403
AATC01002253
162028
Bacillota
ACG
Arg
>WENV079379
AATC01000024
240190
Bacillota
TTT
Lys
>WENV079427
AATC01004403
240190
Bacillota
TTT
Lys
>WENV079451
AATC01005664
240190
Bacillota
TTT
Lys
>WENV079438
AATC01005109
146741
Bacillota
CAT
Met
>WENV079449
AATC01005664
247849
Bacillota
TGT
Thr
>WENV079425
AATC01004403
247849
Bacillota
TGT
Thr
>WENV079381
AATC01000024
247849
Bacillota
TGT
Thr
>WENV079406
AATC01002505
299139
Bacillota
TGC
Ala
>WENV079444
AATC01005109
238224
Bacillota
TTT
Lys
>WENV079456
AATC01006637
45160
Bacillota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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