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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170005367
AMCI01003359
235097
Bacteroidota
TTT
Lys
>WENV170005386
AMCI01003610
235097
Bacteroidota
TTT
Lys
>WENV170005471
AMCI01005083
235097
Bacteroidota
TTT
Lys
>WENV170005476
AMCI01005407
235097
Bacteroidota
TTT
Lys
>WENV170005517
AMCI01006457
235097
Bacteroidota
TTT
Lys
>WENV170005224
AMCI01000507
338155
Bacteroidota
CTC
Glu
>WENV170005479
AMCI01005496
338155
Bacteroidota
CTC
Glu
>WENV170005337
AMCI01002544
95618
Bacteroidota
TAG
Leu
>WENV170005607
AMCI01008559
415410
Bacteroidota
TTG
Gln
>WENV170005458
AMCI01004843
411543
Bacteroidota
CTG
Gln
>WENV170005467
AMCI01005010
59689
Bacteroidota
CAG
Leu
>WENV170005297
AMCI01001703
155123
Bacteroidota
GTT
Asn
>WENV170005341
AMCI01002675
155123
Bacteroidota
GTT
Asn
>WENV170005298
AMCI01001703
155123
Bacteroidota
GTT
Asn
>WENV170005195
AMCI01000219
338124
Bacteroidota
CCG
Arg
>WENV170005523
AMCI01006680
338132
Bacteroidota
GCA
Cys
>WENV170005416
AMCI01003995
338132
Bacteroidota
GCA
Cys
>WENV170005365
AMCI01003317
338132
Bacteroidota
GCA
Cys
>WENV170005366
AMCI01003327
46489
Bacteroidota
TGA
Ser
>WENV170005216
AMCI01000441
149691
Bacteroidota
GTT
Asn
>WENV170005215
AMCI01000441
149691
Bacteroidota
GTT
Asn
>WENV170005198
AMCI01000263
144656
Bacteroidota
GTG
His
>WENV170005505
AMCI01006134
235207
Bacteroidota
CAT
Met
>WENV170005290
AMCI01001438
235207
Bacteroidota
CAT
Met
>WENV170005637
AMCI01009344
144590
Bacteroidota
GTT
Asn
>WENV170005636
AMCI01009344
144590
Bacteroidota
GTT
Asn
>WENV170005180
AMCI01000002
144590
Bacteroidota
GTT
Asn
>WENV170005179
AMCI01000002
144590
Bacteroidota
GTT
Asn
>WENV170005178
AMCI01000002
144590
Bacteroidota
GTT
Asn
>WENV170005284
AMCI01001361
144655
Bacteroidota
GGC
Ala
>WENV170005575
AMCI01007917
240012
Bacteroidota
CCC
Gly
>WENV170005473
AMCI01005311
44852
Bacteroidota
TAA
Leu
>WENV170005197
AMCI01000241
44852
Bacteroidota
TAA
Leu
>WENV170005173
AMCI01000002
44852
Bacteroidota
TAA
Leu
>WENV170005462
AMCI01004876
95986
Bacteroidota
GTA
Tyr
>WENV170005627
AMCI01008941
16494
Bacteroidota
GGA
Ser
>WENV170005478
AMCI01005496
23696
Bacteroidota
GCT
Ser
>WENV170005612
AMCI01008674
59498
Bacteroidota
GAG
Leu
>WENV170005357
AMCI01003150
59498
Bacteroidota
GAG
Leu
>WENV170005217
AMCI01000449
16224
Bacteroidota
GGA
Ser
>WENV170005300
AMCI01001770
16220
Bacteroidota
GGA
Ser
>WENV170005214
AMCI01000441
338125
Bacteroidota
CCT
Arg
>WENV170005466
AMCI01005010
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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