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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170005193
AMCI01000181
369487
Bacteroidota
>WENV170005320
AMCI01002122
369487
Bacteroidota
>WENV170005290
AMCI01001438
258780
Bacteroidota
>WENV170005505
AMCI01006134
258780
Bacteroidota
>WENV170005467
AMCI01005010
65110
Bacteroidota
CAG
Leu
>WENV170005182
AMCI01000004
453376
Bacteroidota
CTG
Gln
>WENV170005183
AMCI01000004
453376
Bacteroidota
CTG
Gln
>WENV170005297
AMCI01001703
159413
Bacteroidota
>WENV170005298
AMCI01001703
159413
Bacteroidota
>WENV170005341
AMCI01002675
159413
Bacteroidota
>WENV170005252
AMCI01000953
325097
Bacteroidota
CGT
Thr
>WENV170005340
AMCI01002621
120345
Bacteroidota
TAG
Leu
>WENV170005195
AMCI01000219
370133
Bacteroidota
CCG
Arg
>WENV170005213
AMCI01000429
63141
Bacteroidota
TGA
Ser
>WENV170005431
AMCI01004226
63141
Bacteroidota
TGA
Ser
>WENV170005627
AMCI01008941
19144
Bacteroidota
GGA
Ser
>WENV170005461
AMCI01004876
138926
Bacteroidota
>WENV170005186
AMCI01000010
155049
Bacteroidota
TAC
Val
>WENV170005511
AMCI01006295
155049
Bacteroidota
TAC
Val
>WENV170005514
AMCI01006326
155049
Bacteroidota
TAC
Val
>WENV170005515
AMCI01006326
155049
Bacteroidota
TAC
Val
>WENV170005528
AMCI01006790
155049
Bacteroidota
TAC
Val
>WENV170005595
AMCI01008247
155049
Bacteroidota
TAC
Val
>WENV170005398
AMCI01003797
20980
Bacteroidota
GGA
Ser
>WENV170005629
AMCI01009063
225567
Bacteroidota
GGC
Ala
>WENV170005225
AMCI01000534
141365
Bacteroidota
GGG
Pro
>WENV170005351
AMCI01002942
141365
Bacteroidota
GGG
Pro
>WENV170005198
AMCI01000263
160434
Bacteroidota
GTG
His
>WENV170005462
AMCI01004876
105253
Bacteroidota
GTA
Tyr
>WENV170005506
AMCI01006138
24259
Bacteroidota
GGA
Ser
>WENV170005178
AMCI01000002
193541
Bacteroidota
GTT
Asn
>WENV170005179
AMCI01000002
193541
Bacteroidota
GTT
Asn
>WENV170005180
AMCI01000002
193541
Bacteroidota
GTT
Asn
>WENV170005636
AMCI01009344
193541
Bacteroidota
GTT
Asn
>WENV170005637
AMCI01009344
193541
Bacteroidota
GTT
Asn
>WENV170005260
AMCI01001139
20913
Bacteroidota
GGA
Ser
>WENV170005525
AMCI01006723
324834
Bacteroidota
CCC
Gly
>WENV170005210
AMCI01000400
313757
Bacteroidota
CTT
Lys
>WENV170005211
AMCI01000400
313757
Bacteroidota
CTT
Lys
>WENV170005536
AMCI01006950
376506
Bacteroidota
GGT
Thr
>WENV170005284
AMCI01001361
160435
Bacteroidota
GGC
Ala
>WENV170005444
AMCI01004435
278748
Bacteroidota
CCC
Gly
>WENV170005234
AMCI01000640
28588
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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