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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170005464
AMCI01004908
159267
Fusobacteriota
CAT
Met
>WENV170005277
AMCI01001331
156979
Fusobacteriota
TCT
Arg
>WENV170005391
AMCI01003704
156979
Fusobacteriota
TCT
Arg
>WENV170005501
AMCI01006118
156979
Fusobacteriota
TCT
Arg
>WENV170005586
AMCI01008094
156979
Fusobacteriota
TCT
Arg
>WENV170005387
AMCI01003665
242889
Fusobacteriota
TGT
Thr
>WENV170005451
AMCI01004732
242889
Fusobacteriota
TGT
Thr
>WENV170005563
AMCI01007707
242889
Fusobacteriota
TGT
Thr
>WENV170005463
AMCI01004908
151855
Fusobacteriota
TGC
Ala
>WENV170005465
AMCI01004908
151855
Fusobacteriota
TGC
Ala
>WENV170005502
AMCI01006118
242887
Fusobacteriota
GTG
His
>WENV170005282
AMCI01001331
248480
Fusobacteriota
TAC
Val
>WENV170005438
AMCI01004323
248480
Fusobacteriota
TAC
Val
>WENV170005608
AMCI01008624
248480
Fusobacteriota
TAC
Val
>WENV170005441
AMCI01004323
415120
Fusobacteriota
GCA
Cys
>WENV170005589
AMCI01008094
113605
Fusobacteriota
TAG
Leu
>WENV170005504
AMCI01006118
113605
Fusobacteriota
TAG
Leu
>WENV170005564
AMCI01007707
346237
Fusobacteriota
TTC
Glu
>WENV170005452
AMCI01004732
346237
Fusobacteriota
TTC
Glu
>WENV170005393
AMCI01003704
346237
Fusobacteriota
TTC
Glu
>WENV170005388
AMCI01003665
346237
Fusobacteriota
TTC
Glu
>WENV170005279
AMCI01001331
346237
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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