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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014157
AVFP01029204
237364
Bacteroidota
TCC
Gly
>WENV170014057
AVFP01004092
179643
Bacteroidota
GTC
Asp
>WENV170014089
AVFP01006633
59355
Bacteroidota
GCT
Ser
>WENV170014139
AVFP01016680
81018
Bacteroidota
GTA
Tyr
>WENV170014081
AVFP01005750
338625
Bacteroidota
TTC
Glu
>WENV170014145
AVFP01019454
338625
Bacteroidota
TTC
Glu
>WENV170014146
AVFP01019454
338625
Bacteroidota
TTC
Glu
>WENV170014014
AVFP01001728
127458
Bacteroidota
GAC
Val
>WENV170014117
AVFP01011488
270933
Bacteroidota
CAT
Met
>WENV170014090
AVFP01006633
127414
Bacteroidota
TGG
Pro
>WENV170013996
AVFP01001412
197220
Bacteroidota
TGT
Thr
>WENV170013995
AVFP01001407
202066
Bacteroidota
CAT
Met
>WENV170014037
AVFP01003100
193473
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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