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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085007
BABB01000389
235097
Bacteroidota
TTT
Lys
>WENV085088
BABB01002580
235097
Bacteroidota
TTT
Lys
>WENV085143
BABB01006104
235097
Bacteroidota
TTT
Lys
>WENV085036
BABB01000824
235102
Bacteroidota
CGT
Thr
>WENV085063
BABB01001680
144657
Bacteroidota
CGG
Pro
>WENV085085
BABB01002454
338155
Bacteroidota
CTC
Glu
>WENV085175
BABB01010597
338155
Bacteroidota
CTC
Glu
>WENV085115
BABB01004410
411543
Bacteroidota
CTG
Gln
>WENV085142
BABB01006092
144695
Bacteroidota
CAT
Met
>WENV085078
BABB01002333
235182
Bacteroidota
>WENV084977
BABB01000200
338124
Bacteroidota
CCG
Arg
>WENV085196
BABB01013159
235203
Bacteroidota
TTT
Lys
>WENV085212
BABB01015457
338132
Bacteroidota
GCA
Cys
>WENV085211
BABB01015457
338132
Bacteroidota
GCA
Cys
>WENV085032
BABB01000638
338132
Bacteroidota
GCA
Cys
>WENV085087
BABB01002501
144688
Bacteroidota
CAT
Met
>WENV085199
BABB01013528
37076
Bacteroidota
TAA
Leu
>WENV085177
BABB01010788
58714
Bacteroidota
CAA
Leu
>WENV085053
BABB01001337
144656
Bacteroidota
GTG
His
>WENV085039
BABB01000919
235207
Bacteroidota
CAT
Met
>WENV085114
BABB01004406
144659
Bacteroidota
GTG
His
>WENV085064
BABB01001680
235180
Bacteroidota
CCA
Trp
>WENV085230
BABB01019131
80607
Bacteroidota
GTA
Tyr
>WENV085184
BABB01011362
80607
Bacteroidota
GTA
Tyr
>WENV085121
BABB01005041
80607
Bacteroidota
GTA
Tyr
>WENV085077
BABB01002231
80607
Bacteroidota
GTA
Tyr
>WENV085023
BABB01000591
80607
Bacteroidota
GTA
Tyr
>WENV085001
BABB01000332
80607
Bacteroidota
GTA
Tyr
>WENV084975
BABB01000172
113604
Bacteroidota
>WENV084972
BABB01000172
113604
Bacteroidota
>WENV085217
BABB01016502
80614
Bacteroidota
>WENV085224
BABB01017162
144590
Bacteroidota
GTT
Asn
>WENV085223
BABB01017162
144590
Bacteroidota
GTT
Asn
>WENV085222
BABB01017162
144590
Bacteroidota
GTT
Asn
>WENV085202
BABB01014438
144590
Bacteroidota
GTT
Asn
>WENV084967
BABB01000140
95559
Bacteroidota
TAG
Leu
>WENV085052
BABB01001325
144655
Bacteroidota
GGC
Ala
>WENV085104
BABB01003488
338164
Bacteroidota
TTC
Glu
>WENV085034
BABB01000648
44852
Bacteroidota
TAA
Leu
>WENV085120
BABB01005041
338165
Bacteroidota
GGT
Thr
>WENV085042
BABB01001059
16224
Bacteroidota
GGA
Ser
>WENV084980
BABB01000253
16224
Bacteroidota
GGA
Ser
>WENV084981
BABB01000274
16220
Bacteroidota
GGA
Ser
>WENV085050
BABB01001279
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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